Pseudomonas fluorescens SBW25, PFLU5339 (katB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGCAGGCACATCGCCCTGCGCCGCCTTGAGCGTGATCGCCAGGTCGCCGAAGTCCACGCCACCGATCAACAGACCAATGGGCGGCATCACCACGTCG CCTACAAACGAAGAAACAATTTTGCCGAAGGCTGCGCCGATGATGATACCGACGGCCATGTCGACCACATTACCTTTGACCGCGAAGGCCTTGAACTCAC TGATCACGCCCATAGGTTATTCCTTGTTACAGATGAGAAGGGTGGCACTTAGTGTAAGTCAGTCGTAGCGGGCTTGCCTGACACAACCGCTAACACTGTT AGCTTTAATCGACACATTAAATCGCAAATAGTTTGCAAAGTGCCACCAATCGCGCGCGAAATACGCGTGGCATCAGTGGCTTACCAGATTATTTTATTAA TCGGGTTGGTATGGCTTTTCTATTTATCTTCTGGCGCTCGGGTCACTAGCCTCTGGCAAGCACAACTGAATGTGCACTAAAAAAACCAGAGGAAACCCTG
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| DNA Sequence for Gene |
>PFLU5339
|katB
ATGAAAACCCCAATGACCCGCGGGCCTGTTGCAGCGCGAACCGCGCTGGTACTGGTGACCGCCAGCCTGCTTTCCCTCTCAGTGCAAGCCGCTAACCTGA CCCGCGATAATGGTGCCGCTGTCGGCGACAACCAGAACTCGCAGACCGCCGGCGCTAATGGCCCGGTGCTGCTGCAAGACGTGCAGCTTATTCAAAAGCT GCAACGCTTTGACCGCGAGCGCATCCCCGAGCGCGTGGTACACGCCCGTGGCACCGGCGCCCACGGCACCTTCACCGTCACTGACAGCCTCAGCGACCTG ACCAAGGCCAAGGTATTCGCAGCCGGCGAAGCCACCCCGGTGTTTGTGCGCTTCTCCGCCGTAGTCCACGGCAACCACTCCCCGGAAACCCTGCGTGACC CACGCGGTTTCGCCACCAAGTTCTACACCGCCGACGGCAACTGGGACCTGGTCGGCAACAACTTCCCGACGTTCTTTATCCGTGATGCCATCAAGTTCCC GGACATGGTCCACGCCTTCAAGCCGGACCCGCGCACCAACCTGGATGACGATTCCCGTCGCTTCGATTTCTTCTCCCACGTACCTGAGTCCACCCGTACG CTCACCGAGCTGTACTCCGACTCCGGCACCCCGGCCAGCTACCGGGAGATGGACGGCAACGGCGTGCACGCCTACAAGCTGATCAACGCCAAGGGCGAGG TGCACTACGTCAAGTTCCACTGGAAGAGCCTGCAAGGCATCAAGAATCTTGATCCCAAGCAAGTCACCGAAGTGCAGGGGCGTGACTACAGCCACATGAC CAACGACCTGGTCACCCATATCAACAAGGGCGACTTCCCCAAGTGGGACCTGTACGTGCAGGTGCTCAAGCCTGAAGACCTGGCCAAGTTCGACTTCGAC CCGCTGGACGCCACCAAGATCTGGCCGAATGTGCACGAGCGCAAAGTTGGACAGATGGTGTTGAACCGTAACCCGGCCAACGTCTTCCAGGAAACCGAGC AGGTGGCCATGGCCCCGGCCAACCTGGTGCCGGGCATCGAGCCGTCGGAAGACCGCCTGCTGCAAGGCCGCGTGTTCTCCTACGCCGACACCCAGATGTA CCGCCTGGGCGCCAACGCCCTGCAACTGCCGATCAACGCGCCACGGGTGACCGTCAACAACGGTAACCAGGACGGTGCACTCAATACTGGCAAGACCACC AGCGGCGTGAACTACCAGCCAAGCCGCCTGGAACCTCGCGAAGAGCCACAGACCGCGCGTTACAGCCAGTCGGCGCTGTCGGGCAGCACCCAGCAAGCGA AGATCCAGCGCGAGCAGAACTTCAAGCAGGCCGGTGACCTGTATCGCTCTTACAGCCCCAAAGAGCGTCAGGACCTGATCGATAACTTCGGCGGCTCCCT GGCCACCACGGATGACGAAAGCAAGCACATCATCCTGTCGTTCCTCTATAAGGCCGACCCGGAATACGGCACTGGCGTGACCAAAGTCGCCAAAGGTGAC CTGGCGCGCGTGAAAGCGCTGGCTGAAAAACTGACTGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGTTGGTTGCGGTCGACGCCCATGCCTGGGCGTCGACCCTTGCAGGAGAACACCTCATGCGTATCTCTATCGGTTTGCTGATGGCCATGCTGGCCTTT GTCGCCCAGGCCGAGTCCCCTGACCCGGTGGCGCTCAAGGCCCAGTTGCAAGACTACTATTTCGACGCTGCCCGGCGGGGCGATATCGACATGCTCAATA CCTTTATCGACTCCGGCTACAGCCTCAACACTCAGGACGACAAGGGCTACACCGCGCTGATCCTCGCCGCCTACCACGGGCAGGGCCCGTTCGTGGAACG CCTGCTCAGCGCCGGCGCCGACGCCTGCGTGCAGGATAAACGTGGTAACACCGCACTGATGGGGGCGATTTTCAAAGGCGAACTGAAGATTGCCCAGCGC CTGCTCGCCACCGACTGCAACCCCGACCAGCGCAACGGCGCCGGGCAGACTGCGGCCATGTACGCCGGGCTGTTCAAGCGTGTCGAGTTGCTGGACGAAC
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| Amino Acid Sequence |
>catalase
MKTPMTRGPVAARTALVLVTASLLSLSVQAANLTRDNGAAVGDNQNSQTAGANGPVLLQDVQLIQKLQRFDRERIPERVVHARGTGAHGTFTVTDSLSDL TKAKVFAAGEATPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDDDSRRFDFFSHVPESTRT LTELYSDSGTPASYREMDGNGVHAYKLINAKGEVHYVKFHWKSLQGIKNLDPKQVTEVQGRDYSHMTNDLVTHINKGDFPKWDLYVQVLKPEDLAKFDFD PLDATKIWPNVHERKVGQMVLNRNPANVFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGANALQLPINAPRVTVNNGNQDGALNTGKTT SGVNYQPSRLEPREEPQTARYSQSALSGSTQQAKIQREQNFKQAGDLYRSYSPKERQDLIDNFGGSLATTDDESKHIILSFLYKADPEYGTGVTKVAKGD LARVKALAEKLTD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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