Pseudomonas fluorescens SBW25, PFLU4559
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCGTTCTACGGCATGTCGACCTTCGAAGGGCCGATGATGGCGATCAAGACCGTCAACTCGCTGTCCCACTACACCGACTGGACCATCGGCCACGTTC ACGCCGGTGCGCTCGGTTGGGTCGCGATGATCTCCATCGGCGCGATCTACCACATGATCCCCAGACTGTTCGGCCGCGTGCAGATGCACAGCGTCGGGCT GATCAACACGCATTTCTGGCTGGCGACCATCGGTACCGTGCTCTACATCGCGTCGATGTGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGTGCAATC AACGATGACGGCACCCTCACCTACTCCTTCGTCGAAGCGCTGCAAGCCAGCCACCCGGGCTATATCGTCCGCGCCCTGGGCGGTGCGTTCTTTGCCACCG GCATGCTGTTCATGGCCTACAACGTCTGGCGCACCGTGCGTGCCTCGGACCCTGCAGAAGCCGAAGCCGCCGCCAAGATCGCCGTTGTGGGAGCCCACTG
|
|
| DNA Sequence for Gene |
>PFLU4559
ATGAAGCATGAAGTAGTCGAGAAGAATATCGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGTATCGGCGGCTTGACCCAGATCGTTCCGCTGTTTT TCCAGGACGTCACCAACAAACCGGTCGAAGGCATGAAGCCGCGCACCGCGCTTGAACTGGAAGGCCGCGACGTCTACATCGCCAACGGTTGTGTCGGCTG CCACTCGCAGATGATCCGCCCGTTCCGTGCCGAAACCGAACGCTACGGCCACTACTCGGTCGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGT TCCAAGCGCACCGGCCCGGACCTGGCCCGTGTGGGCGGGCGTTACTCCGATGACTGGCAACGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCTGAGT CGAAAATGCCGGCGTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAGGACACCGCGAAGAAGATGGAAGTCTTGCGCACCCTGGGCGTGCCCTACAC CGACGAAGACATCGCCGGTGCAGCCGCAGCCGTGAAGGGCAAGACCGAAATGGACGCATTGGTGGCCTACCTGCAAGGCCTTGGCACCATCATCAAAAGC AAACGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCTTCATGGATATCGGGATGATTCGTGGCTTGGGCACCGTTGTGGTGATGGTGGCCTTTATCGGCCTGGCGTTGTGGGTGTTCAGCCCCAAGCGCAAGT CGGAGTTTGAAGACGCGACCTTGCTGCCTTTTGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGACTACGTTC TGGAGTCTGTACGTCACAGTCCTCAGCCTGGGTACCATCTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGAAAGGGCCAGCGCGCCGAGCAAACCGACG AGACCGTCGGCCACTCGTTCGACGGCATCGAGGAGTACGACAACCCGCTGCCCAAATGGTGGTTCATGCTGTTCGTCGGCACCATCATCTTCGCCCTCGG CTACCTCGCGCTGTACCCCGGCCTGGGCAACTGGAAGGGCCTGTTGCCGGGCTACAACTACCTCGACAACGACAAGCAAACCCCCTTCGCCAACGGCCAG
|
|
| Amino Acid Sequence |
>cbb3-type cytochrome c oxidase subunit II
MKHEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDVYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWQRAHLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAAAAVKGKTEMDALVAYLQGLGTIIKS KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|