Pseudomonas fluorescens SBW25, PFLU3566
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACCCCGCCATCGTGCGTTTATCGTGCAAACCCGCCACGGCACCGCCCGCGCCCTGGGCACGCATTTCAGCGTTCGAGTGGCAGAGCAGAGCAGCCGCGT GGCGGTGCTTGACGGCGCGGTGGAAATGCTCCCGGAGCATGCCCGCCATGGGCTGATCCTCAAGGCCGGTGAGCAAAGCGCATTCGGCAGCGACGGCGTG GCAGCGGTGCAGCCGCTGGAAATCAGCGCAACCACCTGGGAAAACGGCATGCTGCTGGCCCAGCAGATGCGCTTGGCGGACTTGCTCGATGAACTGGGAC GCTACCGTCACGGCGTGTTGCGCTGCCACGACAGCGTGGCCGGGCTGACCGTCTCCGGGGCGTTCCCCTTGCGAGACACCGACGCCAGCCTGCGTCTGTT GCAGGAAACGCTGCCGGTCAAGGTCAGCAGCCTGACTGGCTACTGGGTGACCGTTGAGCCTCGCTGAAATTATTGTCGATATTCGCTGATACCTTTTTCG
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| DNA Sequence for Gene |
>PFLU3566
TTGTCGCCCGGTGTAGGGGAGAACCCTCAACTTTGCAGCGCGCCGACAGGAATCCCCATGACCTTCACACCGCACCCCATCCGCCCCTTGAAGGCCTTGA GCCTGGCCGTTGCCCTGGCAGCCATCGCACCGTTGCACAGTGCCGTGGCCGCCGATGCGGCGTCGACCAGTGCGGTGCGCAGCTACACCCTTGCGCCGGG GCCGTTGGGCAACGTACTGGCGCAGTTCGCGGCGTTGTCCGGGGTGCCGTTGTCGTTTGATTCCACACTGCTCAATGACCAGCAAAGCGCTGGCTTGCAG GGCCGTTTCACTGCGCAAGCGGGCTTCATGCAGTTGTTGCAAGGCAGCGGTTATACCCTGCAAAGCACCGGCGCTCACGGCTACACCGTGGTGCCCGAAG AGACGGGCGATGCGTTGCAGCTGGGTGCGACCACCATCAGTGGGGAGGGCGGGGCGCAGGCGGACACCTATGCCGGCGGCCAGGTCGCACGCTCGGCGCG CCTGGGGGTATTGGGCACTCGTTCGATCAATGACGTGCCGTTCAGCGTGGTCAGCTACACCGCCAAGACCATCGCCGACCAACAGGCGCGCACGGTGGGC GATGTGCTGCTCAATGACGCCTCGGTGCGCCAGTCTTCCGGCTTTGGCAACTTTTCCCAGGTGTTCACTATTCGCGGCCTGCCGCTGAGCACCGATGACA TTGCCTTCAACGGCCTGTACGGCGTGCTGCCCCGGCAGATCGTCACCACGGAGGCGTTGGAGCGGGTGGAGTTGTTCAAAGGCCCCAACGCGTTCGTCAA TGGCGTGTCGCCAGCGGGCAGCGGCATCGGCGGCAGCGTCAACCTGGTGCCCAAGCGCGCCGAAGACGCGCCCACCCGCAGCGTGACCCTCGACACCACC ACCGATGGTCAGCGCGGCGGCCACCTCGACCTGGGCCAGCGGTTTGGCGAAGACAACCGCTTCGGCGCGCGGGTCAACCTGGCCAGGCATGGCGGCGACA CGGCCATTGAGGATGAATTCAAAAGCTCGCAACTGGTGGCCGTCGCCCTGGATTACCGTGACGATCGCCTGCGCGTGTCCACCGACTTCGGCTACCAGAA AGAGCGCATCAACAACGGTCGCTCGGTGGTCTACCCCAATGGCACCCAAGTGCCGAAGGCGCCGTCAGCCAAGCACAATTACGCCCAGGACTGGAGCTGG TCGGAGCTGGAAGACACCTACGGCATGTTCAATGCCGAATACGATTTGAATGAAAGCTGGACCGCCTATGTGGGCGGCGGCGCCAAGCATACGCGGGAGA ATGGCCAGTATTCGTCGCTGTACGTGGGCAATGATGGCAGCGGGCGTGTGGGCTTTTTGTACTCGCCTCACGATGAAGACAACAAGAGCGCCATGGCCGG GTTGAACGGGCATTTCAACACCGGCCTGGTGAGCCATCAGATGAACGTCGGTTTGTCGGGGATCTGGGGCGAGCAGCGTTCGGCCTTCGAGGCGATCCTG CAGGCCAACCGCCGACCGGGCAATCTGTACAACCCGACCCAGATTCCGCGCCCGAGCGTTACTTACTTCGGCAGCGATATCCATGACCCGCGTGTCGTCG GCAAGAATCGCATCAAGAGCGCGGCGGTGTCCGACACCCTGGGCTTTATCGATGATCGCGTGCTGCTGACCCTGGGCGTTCGGCGCCAGACCATCGAGGT GGATGCATGGAACACCACCACGGGAGCGCGCAACGCCAACTATGCCGAAAGCATCACCACGCCGGTGTACGGCCTGGTGGTCAAACCGTGGGAGCACGTG TCGTTCTATGCCAACCGCATCGAGGGGCTGGCCCAGGGACCGACGGCGCCATTGAGCAATGTCACCAACCCCGGCGAGGTCTTTGCGCCTAACCGCAGCA AACAGACGGAAGCCGGGGTGAAGCTGGATTGGGACAGCGTTGGCGCCACCTTGGGCGTGTACCGTATCGAGCAGCCGAACAGCTCCACGTCGCGCCTGCC CGGCAATAGCCTGGACACCTTCAGTGTCGACGGTGAGCAGATCAACAAAGGCGTGGAGCTGAACGTTTTCGGCGAACCGGTTGACGGCCTGCGTCTACTG GCCGGCGCTACCTGGATGAACACCGAATTGAAGAACACCTCCAACGGCCTCAGCGACGGTAACCGCGCTGCCGGCGTGCCGCGCTTCCAATACAATGTGG GCGCCGACTGGGACATTCCCGGCCTCCAGGGCGCCGCCGTCAACGCGCGGATGCTGCGCACCGGGGGCGAATACGTCAACGCCACCAACACCCTGAGCAT CCCGGCCTGGACCCGCGTCGACCTCGGCGCCCGGTATGGCTTCAAGGCCGACGACAAGTACATCACCCTGCGCGCCAACGTCGAGAACGTGGCGAACAAG GCCTATTGGGCGTCGGCGTCGACGGCCAATAACTACCTGACCCAGGGCGAGCCGCGCACCGTCAAGCTCTCGGCAACAGTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGTAACCACGCTTGTCTCTGGCTGGCGGGCTTGTTGTGGTGAGCGGGGCAAGCCCGCTCACCACAATTGACACCGGGTTTCTGCTACCGTCGAGGGAT TCGATTGAGAGTAGGTAGCGACAATGAGCAATGACACCCCGCACTCCGTCATCGACTTCTGGAAAAACGCCGGCCCCAAACGCTGGTTCGCATTGCGTGC ATTCTGCTACCTGCCCTTCGAACATTCGGAAGACCCGGCGGATCAGCAGCGCTCTCTGGTTCTCAACCAGCCACTGGGCGCCACTACCTACCATTGGGCC AAGGAACATGCCGAGATCATCCAGCGGTTCGGGCGTTTTCCCCATCGTAATGAGGTGCTGGCTCGGGCGACCTCAGACGAAGAGCGCGTTTTCCTGAACA AGGGCGGGTTTGCGGGCTAGCCCGGTATTCCGCCGAGGAATGCCCCCATAAAAACAGCGCATTGTCTTTCTGGCGGCACATCTCGTAGCGTGGTGCTCCC
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| Amino Acid Sequence |
>ferrichrome receptor protein
MSPGVGENPQLCSAPTGIPMTFTPHPIRPLKALSLAVALAAIAPLHSAVAADAASTSAVRSYTLAPGPLGNVLAQFAALSGVPLSFDSTLLNDQQSAGLQ GRFTAQAGFMQLLQGSGYTLQSTGAHGYTVVPEETGDALQLGATTISGEGGAQADTYAGGQVARSARLGVLGTRSINDVPFSVVSYTAKTIADQQARTVG DVLLNDASVRQSSGFGNFSQVFTIRGLPLSTDDIAFNGLYGVLPRQIVTTEALERVELFKGPNAFVNGVSPAGSGIGGSVNLVPKRAEDAPTRSVTLDTT TDGQRGGHLDLGQRFGEDNRFGARVNLARHGGDTAIEDEFKSSQLVAVALDYRDDRLRVSTDFGYQKERINNGRSVVYPNGTQVPKAPSAKHNYAQDWSW SELEDTYGMFNAEYDLNESWTAYVGGGAKHTRENGQYSSLYVGNDGSGRVGFLYSPHDEDNKSAMAGLNGHFNTGLVSHQMNVGLSGIWGEQRSAFEAIL QANRRPGNLYNPTQIPRPSVTYFGSDIHDPRVVGKNRIKSAAVSDTLGFIDDRVLLTLGVRRQTIEVDAWNTTTGARNANYAESITTPVYGLVVKPWEHV SFYANRIEGLAQGPTAPLSNVTNPGEVFAPNRSKQTEAGVKLDWDSVGATLGVYRIEQPNSSTSRLPGNSLDTFSVDGEQINKGVELNVFGEPVDGLRLL AGATWMNTELKNTSNGLSDGNRAAGVPRFQYNVGADWDIPGLQGAAVNARMLRTGGEYVNATNTLSIPAWTRVDLGARYGFKADDKYITLRANVENVANK AYWASASTANNYLTQGEPRTVKLSATVDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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