Pseudomonas fluorescens SBW25, PFLU3041

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CGCGAACGCAGCACCTTTATCCCGATCCTGGCCAACGGCTTTGCCCGTCACACCACCGAGATCCTGGTGCACCACGCCGAGCGTGAGCACGGCGAATCCA AATACAGCGCCATGCGCCTGATCAGCCTGATGTTCGACCTGCTGACGTGCATGACCACCACCCCGCTGCGCCTGCTGTCCATCGTCGGCTTCAGCCTGGC GGCGCTGGGCATGCTGTTTGCCTTCGCGTTGATCGTCATGCGCCTGGCTTTCGGTGCCGACTGGGCCGGTGACGGCTTGTTCGTGCTGTTCGCCGTGCTG TTCGTCTTTACCGGCGGCCAGTTCATCGGCATGGGCCTGCTGGGTGAATACCTGGGCCGCATGTACAGCGACGTGCGTGCCCGCCCGCGCTTCTTTATCG AAAAAGTGCTGCGCAACCAACCGGCAGCACCGGCTCCCGTGGTCGTCGTTGACGGCCTGGTGTCCTCCCATACCTCTACTTCTGCTGATCAGGTCTAAAC
DNA Sequence for Gene
>PFLU3041
ATGAGTTCAAAAGCTGTTGTATTCGCGTATCACGATATTGGTTGTGCAGGCATCGAAGCGCTGCTCAATACCGGTTACGACATTGCCGCTGTGTTCACCC ATGCCGATGACCCGAAGGAAAACAACTTCTACGGTTCCGTCGCCCAGTTGTGCGCGCGCAATGGTATCCCGGTGCACGCTCCGGAAGACGCCAACCACCC GCTGTGGATCGAGCGCATCGCCAAGCTGAACCCGGACTACCTCTTCTCGTTCTACTACCGCAACCTGCTGAGCGAGCCGCTGCTGGCCACGGCGCGCAAA GGCGCGTTCAACCTGCACGGCTCGTTGCTGCCTAAATACCGTGGCCGCGCCCCGGCCAACTGGGTGCTGGTCAACGGTGAAACCGAAACCGGCGTGACCT TGCACCGCATGGTCAAGCGTGCCGATGCCGGCGCGATCCTGGCCCAGCAGAAAGTCATCATCGAGCGCAGCGACACCGGCCTGACCCTGCACGCCAAACT GCGCGACGCCGCCAGCAACCTGCTGCGCGACGCCCTGCCGCAACTGGCCCAAGGCAAACTGGCGGAAACCGCCCAGGATGAAAGCCAGGCCACGTACTTC GGTCGCCGCACCGCTGCCGATGGCAAGTTGGAGTGGAAAAAACCGGCTGAGGAACTGTTCAACTTGGTGCGCGCCGTGACCCAACCTTACCCAGGTGCCT TCTGCGCCGTGGGCGAGCACAAGCTGGTCGTGTGGCAGGCCGACGTGGTCAAGGGCAACGAAGGCCTGGCGCCGGGCCGTGTGATCAGCGTCAACCCGCT GCGTATCGCGTGCGGTGAAGACTCCCTGGTGATCAAGTTCGGCCAGCGCAACGACAACGGCCTGTACCTGGCCGGCCCGTCCCTGGCCAACGAATTGGGC CTGGTCGACGGTTCCGTGCTGCGCGGCGCCGAGTCCGGCCGCAAACCGCGCCGTACCCGCGTGCTGATTCTGGGCGTGAACGGCTTTATCGGTAACCACC TGTCCGAGCGCCTGTTGCGTGACGACCGCTACGAAGTCTACGGCCTGGACATCGGCTCCGACGCCATCGAGCGCCTGCGCAGCCACCCGAACTTCCATTA CGTCGAAGGCGATATCAGCATCCACACCGAGTGGATCGAGTACCACATCAAGAAATGCGACGTGGTCCTGCCGCTCGTGGCCATCGCCACACCCATCGAA TACACCCGCAACCCGCTGCGCGTGTTCGAGCTGGACTTCGAAGAAAACCTCAAGCTGGTGCGCTACTGCGTCAAGTACAACAAGCGCGTGATCTTCCCGT CGACCTCCGAAGTCTATGGCATGTGCCAGGACCAGTACTTCGACGAAGACACCTCCAACCTGGTGGTTGGCCCGGTCAACAAGCAGCGCTGGATCTACTC GGTCTCCAAGCAACTGCTGGACCGCGTGATCTGGGCCTACGGCGCCAAGGGCCTGAACTTCACCCTGTTCCGTCCCTTCAACTGGATGGGCCCGCGCCTG GACCGCCTGGACTCGGCACGCATCGGCAGCTCCCGCGCCATCACCCAGCTGATCCTCAACCTGGTGGAAGGCACGCCGATCCGCCTGTTCGACGGTGGTG AGCAGAAGCGTTGCTTCACCGACATCGCCGACGGCATCGAAGCCCTGGCGCGCATCATTGATAACGACAATGACGCGTGCAATGGCCAGATCATCAACAT CGGCAACCCGGAAAACGAAGCCAGCATCCGCCAGTTGGGCGAAGAGTTGCTGCGTCAGTTCGAAGCGCACCCGCTGCGTGGCAACTTCCCGCCGTTCGCC GGTTTCCGCGATGTCGAGAGCAAAGCGTTCTACGGCACCGGTTACCAGGACGTGGCGCACCGCAAGCCAAGCATCGAAAACGCCAAGCGCCTGCTGAACT GGGAGCCGACCGTGGAGATGAGCGAAACCATCGGCAACACGCTGGACTTCTTCCTGCGTGAAGCCATGCTTGAAATCGCGGACAAAAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGAGGCAGGTCTTCGCATCGACGTCGACACCTACCGTGGCACCCGTGAAGGTGTGCCGCGCTTGCTCGAAACCCTGGATGAAGCTGGGGTAAAAGCGAC GTTCTTCTTCAGTGTCGGGCCGGACAACATGGGGCGCCACCTGTGGCGCCTGATCCGCCCGCAGTTCCTGTGGAAGATGCTGCGTTCCAACGCCGTGGGC TTGTATGGCCTGGACATTTTGCTGGCCGGCACCGCCTGGCCGGGCAAACCGATCGGCCGCGACCTGGGGCACTTGATGCGCCAGGCCAAGGCGGCCGGGC ATGAAGTCGGCCTGCACGCCTGGGATCACCATGGCTGGCAAGCCAACACCGGGCGTTGGAGCGAAGCGCAGCTGGTCGAGCAGATTCGACGCGGCGTGGA GACCCTGAGCGACATCCTCGGCGAACGTATCGACTGTTCAGCGGCCGCCGGTTGGCGCGCCGATGAACGCGTCGTGCAAGCCAAGCAAGGGTTCAACTTT
Amino Acid Sequence
>bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSSKAVVFAYHDIGCAGIEALLNTGYDIAAVFTHADDPKENNFYGSVAQLCARNGIPVHAPEDANHPLWIERIAKLNPDYLFSFYYRNLLSEPLLATARK GAFNLHGSLLPKYRGRAPANWVLVNGETETGVTLHRMVKRADAGAILAQQKVIIERSDTGLTLHAKLRDAASNLLRDALPQLAQGKLAETAQDESQATYF GRRTAADGKLEWKKPAEELFNLVRAVTQPYPGAFCAVGEHKLVVWQADVVKGNEGLAPGRVISVNPLRIACGEDSLVIKFGQRNDNGLYLAGPSLANELG LVDGSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHPNFHYVEGDISIHTEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDQYFDEDTSNLVVGPVNKQRWIYSVSKQLLDRVIWAYGAKGLNFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDACNGQIINIGNPENEASIRQLGEELLRQFEAHPLRGNFPPFA GFRDVESKAFYGTGYQDVAHRKPSIENAKRLLNWEPTVEMSETIGNTLDFFLREAMLEIADKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site