Pseudomonas taiwanensis DSM 21245, H620_RS0106715 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00010.10_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTTACCGCGGGCCAGCGAGGTGAAGGCGATGGCCGACTGCACCGTGGCCGGCAACGCGCACAAATACAGCACGCCCAGGTACAACTCGTTGCCCACCAG CGGCACGAACAACGGCTTGAAGGCCATCCCCAGCAAAGGAAACAGCACGAAGGTGCAGGAGAATACCAACAGGTGCAGACGCCAGTGGCCGGCACCGGCA ATGATGGCCTCACGCGACAATTTGGCGCCATGCAGGAAGAACAGCAAGCCGATGGCCAGGTTGGTCAACCAGCCAAAGTACAACGCCCCATCACCCGAGC AGGGCAGCACGGTGGCAATGAACACCACACTGAGCAGCGCCAGGGTGAAATTGTCGAATAACATGCGCAAATACTTCATCACAGATTCCGTCTTGTCATT GTGCTGGGGCAGACGATAAGGTCTGGGCCTTTTTCCCGCTAACGCCGGAACCCCCGCCGGTATCGCTGAACGGACACTCCGTCGCACAGGACCCGCCCCC
|
|
| DNA Sequence for Gene |
>H620_RS0106715
|ampC
ATGTCACGCTTTCTTCTTGCCACGCTGGCTACCGCTACTTCCCTCGCCTGGGTCCATGCCTCGGCCCACGCCGATGACACCCTGCAAGCACGGGTGACCC AGACCATCCGCCCGCTGATGCAGGCGTACGGGATCGCCGGCATGGCAGTGGGGGTCTACCACAAGGGCCAGGCGCATTACTTCAGCTTTGGCGTGGCCGA CAAGGCAGCGGGCACACCGGTCAGCGCCGATACCCTGTTCGAGGTCGGTTCGCTGAGCAAGACCTACACGGCCACCCTCGCGGCCCTGGCCAGTGCCGAA GGCAAGCTGGACCTCGATGCGCCTGCCCGCCGCTACCAGCCCGCACTGGCCGGCACGTATCTGGGTGATGTCAGCGTGCTGGAGCTTGGTGCCTACAGCG CCGACTGCCTGCCCTTGCAGTTCCCCGACGATGTGCAGACGCCACGGCAGGTGCTGACGTTCTTCCGCCAGTGGAAACCGCACAGTGAGCGCGGCACTCA GCGCTGCTACTCGAACCCCAGCATTGGGCTGTTTGGCGATCTTGCAGCACGCGCCCAGCATCGGCCTTTCGACCCGTTGATGACCCAGGGGCTATTGCCG CGAATGGGTCTGGAGCACACCTATCTGAACGTCCCTCCCGAAGCGCGTAGCCTCTACGCCCAGGGTTATGACGCCCAGGACCAACCCGTTCGGGTCAACC CCGGCCCATATGCCGACCCGGCGTACGGCATCAAGACCAGCGCCACCGACCTGCTGCGTTACGTACGCCTGCACATGCAACCCTCCGCCTTGCCTCAACC CCTGCAGGAGGCCACCGCGATCACCCAGGCAGGTTACTTCCAGGTCGGCACAATGACTCAGGGCCTGGGCTGGGAGCGCTACCCCTACCCTGTCGACCTG CAGACCCTCGTCGATGGCAACAGCCCCAGGCTGATCCGCGAACCTCAGAGCACCCAACGCCTGAAGCCTGCCAGTCCCGCCTTGCGCAACGCCTGGTACA ACAAGACCGGCTCCACCAATGGCTTTGGTGCCTACGCCGTATTCATTCCCTCCGAAGGCCAGGCCGTGGTGCTGCTAGCCAACCGCAACTACCCCAACGA GGCGCGGGTTCGGGCTGCATGGCAGATTCTGTCCGGCCTGTCGCATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGCGACACCCTTGAAAAGGCCCCGACAGGTGGATTGTCCGACAAGATGTAGTGAGAAAAAATATTCACTACAAAACGGTTGACGCCGTTCATCCGCCT TGGGCATGATGAGGCCGTCTCCCTGATCGGGAGCGGTGGCAAGGGTATTCCAGACGGCCTGCGCGGTAACGCAGGCCGTTCGTGGAGAGGGAACTGTCCA AAAGGCAGCGTGAGAAAGCCCCTGTTGCGATGCTGCTGTAGCAGCCGTGGTAGTGCGCTACACCGTGGTGGCGCCAACTGTGAAAATCACAATCAATAGG TAATGGGGGCTTTATGATGAACTTGAACAACAATCCCACGATCGACCAACTGTCCAAGCTGTTCGCCGCACGCAAGGACAGCCTCGACGATCACCTGCTG TGGGTCAGCCAGACCGGTGAGGTACGCCTCGACCGTCTGCCGCCAAACACCGTCGAAGATGAATTCGAAGCGCACCTGCCCAGCATGCGCGCACGCTTCA
|
|
| Amino Acid Sequence |
>beta-lactamase/D-alanine carboxypeptidase
MSRFLLATLATATSLAWVHASAHADDTLQARVTQTIRPLMQAYGIAGMAVGVYHKGQAHYFSFGVADKAAGTPVSADTLFEVGSLSKTYTATLAALASAE GKLDLDAPARRYQPALAGTYLGDVSVLELGAYSADCLPLQFPDDVQTPRQVLTFFRQWKPHSERGTQRCYSNPSIGLFGDLAARAQHRPFDPLMTQGLLP RMGLEHTYLNVPPEARSLYAQGYDAQDQPVRVNPGPYADPAYGIKTSATDLLRYVRLHMQPSALPQPLQEATAITQAGYFQVGTMTQGLGWERYPYPVDL QTLVDGNSPRLIREPQSTQRLKPASPALRNAWYNKTGSTNGFGAYAVFIPSEGQAVVLLANRNYPNEARVRAAWQILSGLSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|