Pseudomonas taiwanensis DSM 21245, H620_RS0104900
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGGGGTCCGGCACGTGTTCGAGCATCTCCAGGCAGGTGACCACGTCGAATTGCCCGGGCATCTCTTCGGCCAGGGCTTCGGCGGTGATCTGCCGGTATT CGACCTGCACGCCGGATTCGAGCTGGTGCAGTTGGGCGACCGCCAGCGGGGCTTCGCCCATGTCGATGCCGGTGACGGTGGCGCCGCGCAGGGCCATCGC CTCGCTGAGGATGCCGCCGCCACAGCCCACGTCGAGCACTTTCTTGCCGGCCAGGCTGACGCGCTCGTCGATCCAGTTGACCCGCAGCGGGTTGATGTCG TGCAGCGGCTTGAACTCGCTTTCGCGGTCCCACCAGCGGTGCGCCAAGGCTTCAAACTTGGCGATTTCGGCGTGGTCGACGTTGCTCATGTGAACAGTCC TCTGAAACTTCGCTAGATTGCGCGGGAGTATACCCGAGCGCCCAGGGCTGAGGGTCGCTATAATCGCCCGCTTTTGACATCCGAACGACGGGGAGAGGCG
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| DNA Sequence for Gene |
>H620_RS0104900
ATGCGCGAGCGACTTTTGGCGGCGGAGAAGGTGACCGGGATCCGCTGGCAGGACGGCGCCCTGCACCTGCTCGACCAGCGTTTGCTGCCATCGCAAGAGC GCTGGCTGGCCTGCGACAATGTCTCACAGGTGGTGGAAGCGATTCGGGATATGACCGTGCGCGGCGCTGCCGCCATCGGCATTGCCGCGGCTTTCGGCCT GGTTCTGGCGCTGCGCGAGCGCCTGGCGGCGGGCGGCGACTGGGAAACCGACCTGGAAGAGGATTTCCTCAACCTGGCCGAGGCGCGCCCGACCGCCGCC AACCTGTTCTGGTCGCTCAACCGCATGCGCGAGCGCCTGCTGCGCTTGCGCCCCGAAGAAGACGTGCTGGCGGCGCTGGAGGCCGAGGCGGTGGCCATTC ACGAGAGTGATCGCGAGGCCAACCTGACCATGGCCCAGCACGGCATCGAGCTGATCCGTCGTCATCAGGGCAACGAGCAGACACTGCTCACCTACGGTAA TGCCGGCGCCCTGGCCAGTGGCGGCTTCGGTACCGCGCTGGGGGTGATCCGCGCAGGGTTCCTGGAGGGTATGGTCGAGCGGGTCTACGCCGGCGAGACC CGCCCGTGGTTGCAGGGCTCGCGGCTGACCGCCTGGGAGCTGGCCCGCGAGAGTATTCCCGTCACCCTGTGCGCCGATTCGGCCTTGGCCCACCTGATGA AAAGCAAGGGCATTACCTGGGTAGTGGTCGGTGCCGACTGCATCGCTGCCAACGGTGACGTGGCCAGCAAGATCGGCACTTATCAGCTGGCAGTCAGCGC CATGCACCATGGTGTGCGCTTCATGGTGGTGGCACCGAGCACCAGCATCGACCTGAACCTGGCGACCGGCGAGGACATTCCGCTGGAAGAGCGTGATGCC GACGAGTTGCTGGATTACGCCGGTACCCGGGTCGCGCCGGATGTGGAAGTGTTCAATCCGGTGTTCGATGTGACTCCAGCGGATCTGATCGATGTAATCG TGACCGAGAAAGGTGTCGTCGAACGACCGGACACCGCCAAGCTGGCGCAATTGATGTGTCGCAAGCGTTTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGGGTGTAGGGCGGGGGCGTCTTTGGGGTCGAGCGCTGCCCGCGCGGGGCATCGCGAGCAAGGCTCGCTCCTACGGTTGTTTCGAGGCAATGAGTTAC TGGCCTGAAACAGGTGTAGGAGCGAGCCTTGCTCGCGATGCCCCGCGCGGGCGGCGCTCGATCGCCCAGGCGATACACCGCTCACGTCAGGCCACCTGCC ACATCTCCCCACTGCCACTGCCTTTGTGGTAACATCCGGCAGTTTCCAAGACCGCCCATGACGGCGGCCTTCATTGCGCAAGTCCATGGCTCAACTCATT GATTTGTCGTAAGTCGTCGCACCCTTATGCGCTGCGGCGGCGAGCTTCGTTCGGCCCTTGAAGGAGGCTGCGAAGTTTCACCAGAAAAAGGAATCAGGCT TCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAACTGAGACAGTCTTACCTCGACTACGCGATGAGCGTGATTGTCGGGCGA
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| Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAEKVTGIRWQDGALHLLDQRLLPSQERWLACDNVSQVVEAIRDMTVRGAAAIGIAAAFGLVLALRERLAAGGDWETDLEEDFLNLAEARPTAA NLFWSLNRMRERLLRLRPEEDVLAALEAEAVAIHESDREANLTMAQHGIELIRRHQGNEQTLLTYGNAGALASGGFGTALGVIRAGFLEGMVERVYAGET RPWLQGSRLTAWELARESIPVTLCADSALAHLMKSKGITWVVVGADCIAANGDVASKIGTYQLAVSAMHHGVRFMVVAPSTSIDLNLATGEDIPLEERDA DELLDYAGTRVAPDVEVFNPVFDVTPADLIDVIVTEKGVVERPDTAKLAQLMCRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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