Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCCGGGCGATGAAGCTGACCCTGACCGACATCCAGGAAAAAACCCTGATGAAGCTGGTGGTGGACGCCGAGACCGACAAAGTGCTGGGGTGCCACATGG TCGGGCCGGATGCAGGCGAGATCATCCAGGGCCTGGGTATTGCGCTCAAGGCCGGGGCTACCAAGCAGCAATTCGACGAGACTATCGGCGTGCACCCGAC GGCGGCCGAAGAGTTCGTGACCTTGCGTACCGCCACGCGCTGACGTGTTAGAGCGGGTTCCCCACGCAGCCTTCGACGCAGTGTTGGGCACCGGCTTTGC CGGTGCTCGCGGTGAACCTGCTCCCACGGCCCACGCGGCGTATCGCGCAATCCTTTGCTCAGCGCAATCCCTTCTATTAATAAACCTCGGTTATAGCCAA AACCAATCGCAAGCATGAGCTTTGCCAATGAGCCTTTATGGGGATGAGCGGTTAGGATTCTCTCCGTCAACTGATTCCAACCCATGAAGGAGCGTCTCTC
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DNA Sequence for Gene |
>H620_RS0124020
ATGCCTATCATCAACAGCCAGGTCAAACCGTTCAATGCCACCGCTTTCCACAACGGCGAATTCGTTCAGGTCAGCGAAGCCGACCTGAAAGGCAAGTGGT CTGTCGTGTTCTTCTACCCGGCCGACTTCACCTTCGTTTGCCCGACCGAACTGGGTGACCTTGCTGACAACTACGAAGAGTTCAAGAAACTCGGCGTGGA AATCTACGGCGTGTCCACCGACACCCACTTCACCCACAAAGCCTGGCACGACACTTCGGAAACCATCGGCAAGATCAAGTACCCGCTGATCGGTGACCCG ACCCACGTCATCTCCCGCAACTTCGATGTGCTGATCGAAGAAGCTGGCCTGGCTGATCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATCG TCGAAATCAACGACGGTGGTGTAGGTCGCGACGCCAGCGAACTGCTGCGCAAGGTCAAGGCTGCTCAATACGTGGCTGCCCACCCAGGCGAAGTCTGCCC GGCCAAGTGGAAAGAAGGCGAAGCGACCCTGGCGCCATCCCTGGACCTGGTCGGCAAGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGTTCGCCCGATGAGTGCCAGCGCGACGACCATGCTGCGTCGAAAACAGGCTTGGCACTTCTCGAACGGATAAAGGTTCATGCACCCGTCGCGGGCGGTG AGCAGCCGCCATAGCTGAAGTTCTCACTGCCCCGTCAAACGCCCGGGCGCCATCGCCTGGGCGTTTTTGTATCCGAAGTTTGAAAAAGGAATCGCCCGTA TGTTGGACGCCACGCTTAAATCGCAACTGAAAACCTACCTGGAGCGGGTCACCCAGCCGATCGAGATCGTTGCTTCCCTCGACGACGGCGCGAAGTCCCG CGAATTGCACGACCTGCTGGTGGAAATTGCCGGCCTGTCGAACCTCATTACCCTGCGCGCGGATGGTGATGACGCCCGTCGTCCCTCGTTCTCGCTCAAC CGCCCGGGTGCCGATATCAGCCTGCGCTTCGCCGGCATCCCAATGGGCCATGAATTCACCTCGCTGGTGTTGGCGCTGCTGCAAGTCGGTGGCCACCCAT
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Amino Acid Sequence |
>alkyl hydroperoxide reductase
MPIINSQVKPFNATAFHNGEFVQVSEADLKGKWSVVFFYPADFTFVCPTELGDLADNYEEFKKLGVEIYGVSTDTHFTHKAWHDTSETIGKIKYPLIGDP THVISRNFDVLIEEAGLADRGTFVINPEGQIKIVEINDGGVGRDASELLRKVKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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