Pseudomonas sp. 2-92, U367_RS0129600
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTTCAAGATCTACCGCCTGGCCTTCTCGCTGGTCTCGGAGACATTTATCAGCGACTACCTGGCCGACCTCAGCGACGCGCCGGAGATCCAACCGGTGTT TCGCCATGTGGTGGCCCTGCACAAAAAAGACGAGCTGGTGCACAAGCACATCTTCCCGCTGTTCGTGCAGCAGGTGGTCGGAGACTTCACCGCGCAGCAA ACCGCCTTGTTCACCCGCGGCATCGCCAACTCCATCCGGATCTTCCCGATGCGCGAGATTTCGGCGTGGCGAATCATCCTGCCGCAACTGCTCGAAGTGT TCGGCGACCAATCGCTGCTACTACCGACTCAATTTACCGAGACCGGCGAAGCGGACTACTCGGCCATGCCCGAGATTCTCAGCTCCATTGGCATACACCC CGACGCGGTGCTGCCTGAGCTGCCAGTGATGAGCGAACCGGTCACCACCGTTTGAAACCAGCGTGCTGCTGATCAATACAAATTCAATAGAGTAATTGTC
|
|
| DNA Sequence for Gene |
>U367_RS0129600
ATGTGTGGATACATTGGCGTCTTTGCCAAACAACCTCGTGCGTTCAACCCGAACATGTTCGATGCCGCCCTGCGTGCAATCCATCATCGCGGCCCGGACA GCTCCAGCCAATGGTTCGACCCCCAAGGCCAGGCCGCCTTTGGCTATGTGCGCCTGGGACTGGTCGGCCTGGGTAACGGCACCCAGCCTATCGTGGCCGA CGAAGGCGACTTGGTGATGATGGTCAACGGCGAGTTCTATGACTATCAACGCATCCGCGCCGAACTGGAGAGCGATGGTTGCCGCTTCAAGACCTCGTCC GACAGCGAAATCGCCATGCACCTGTACCGCCGCCATGGCGTACGCGGCCTCAAGCAACTGCGCGGCGAATTCACCATCCTGATCTTCGATCGCCTGCGCA AAAAGCTGTTTGCCGTGCGTGACCGGGTGGGCGTCAAGCCGCTGTACTACACCGAGCATGAAGGTGCCTGGTACTTCGCCTCCGAAATCAAAGCCTTGCT AGCAGCCGGTGTACCCGCGCAGTGGGACCACGAAGCCTACGCCAATCGCGGTTTCATCCTGCGCGACCGGACTGTGTTCAACAATATTCGCAGCGTGAAA CCAGGTTGCTGGATCATCGCCGATGAAAGCGGCCTGCAAACCGAACAGTACTGGGACTGGGACTTCCCGGATGCCCAAGCCACCGAGCAGCGCAGTGAAG CCGAGATGATCGAGTCCCTGCGCAACACCATCGAAGAGTCCGTACGCCTGCGCCTGCATGCCGATGTACCGGTCGGAGTGTGCCTGAGTGGCGGTCTCGA CTCGTCGGCCATGCTCGGCATCGCCACCGAGCTGACCGGCCAGCCATTGCAGGCGTTCCACTTGTCGTTCGAAGGTGAGCAGGCCTACGACGAACGCCAG TACGCCGAAGTGGCCGCACGGCATAACCGTGCCCACCTCAATGTGCTGTCGGTGAACTCCTCCGACATGGCGGATAACTTCGAAAATGCCCTGTGGCACG CCGAAATGCCCTTCGCCAACGCTCACAGCGTGGCCAAGTACCTGCTGTGCAAATATGTGCAGAATCAGGGCATGCGCGCCGTACTCACTGGTGAAGGTGC CGACGAAGTCTTCGGCGGCTACCCGCACTATCGTCGCGACATGGTGTTGTACAACCACGAAAACCAGGACCCGACCGCGATCGCCGAACTCAGCCGACGC CTGCATGCCAGCGAAGATCGCTACCTGCCCGGCGGCAAAAATGATGTGAAATGGGTGCAGGACGAACTCGGCCATGGCGTGTCCTGGCTGCAAACCCAGT CGGCGCTGTTCGGCCCCCTGGCGCAGTTGTACAGCGATGACTTCCGTGAGCGTTTCAGCAATACCGATGCCTATCGCGAGTTCTACGATCGCCTGAGCCC ACGGGCGCTCAACGGCTGGGAGCCGGTGAACCGTTCGCTGTATATGGTGGCCAAGTCCAGCCTGCCCAACGTGGTGCTCACCTCCCTGGGAGACCGCATG GAAATGGCCGGCAGTCTGGAAGGTCGACCACCGCTGCTCGATCACCAAGTGATTGAGGCCGCGTGCCGCCTGCCAGTGAACATGAAAGTGCGCGGCGCCA CCGAGAAATACGCGCTGCGCGAAGCCATGCGCCCTTATGTGCCCCAGGCTGTGCTGGATCGCAAGAAGCAGTACTTCCGCGCCCCGCCGGCATCCGAAAG CCCGCAATCGAAGCTGTATGAAATGATCAACGACGTGTTGAGCGGCCCGGCATTGAATAACGTACCGTTCTTCGACCCGCGTAAAGTACGCGCCTTGCTG GCAACCCTGCCAAGCTTGTCCACCGCCCAACGCGCTTCGGCAGACAACCTGCTGATGGAAATCGCCGGGCTGTGCCTGATGCAAAAACGCTTCGCCTTGA ACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTTCCCGGCGGCACCTCGCGATCGCGGTGTGCCGCCTGACCCAAGGAGGGTCCATGCTGAAAAAACATCTGTCTCTTGCCGTGCTCGTCACCCTGGTATG GGGCGTCAACTTCCCCATCACCAAACTCGGCCTGCGCGCCATCGACCCGTTTGTACTCACGGGTATCCGCTTCGCCCTTGCCGCCCTGCCGCTGGTGTTC TTTATCAAGCGTCCCGCCGTCAAATTCAGCTACGTGGCCGCCTATGGCTTCATCTTCGGGCTGGGCATGTGGGGCGTGATCAACTATGGCATCCAGGTGG GCGTGAGCCCCGGTATTGCCTCATTGATCATTCAACTCAGCGTGTTCTTCACCATGGGCTGGGGCTTTTTGCTGTTCAAGGAAAAGATCCGTGGCGCGCA GATGCTCGGCGCCGTGCTGGCCTTGATCGGCCTGGCCGGAATCATCTCCACCCAGGAAGGTAACCACGCGGTGCTGGGCGTCATGCTGATCGTGCTCAGC
|
|
| Amino Acid Sequence |
>asparagine synthase
MCGYIGVFAKQPRAFNPNMFDAALRAIHHRGPDSSSQWFDPQGQAAFGYVRLGLVGLGNGTQPIVADEGDLVMMVNGEFYDYQRIRAELESDGCRFKTSS DSEIAMHLYRRHGVRGLKQLRGEFTILIFDRLRKKLFAVRDRVGVKPLYYTEHEGAWYFASEIKALLAAGVPAQWDHEAYANRGFILRDRTVFNNIRSVK PGCWIIADESGLQTEQYWDWDFPDAQATEQRSEAEMIESLRNTIEESVRLRLHADVPVGVCLSGGLDSSAMLGIATELTGQPLQAFHLSFEGEQAYDERQ YAEVAARHNRAHLNVLSVNSSDMADNFENALWHAEMPFANAHSVAKYLLCKYVQNQGMRAVLTGEGADEVFGGYPHYRRDMVLYNHENQDPTAIAELSRR LHASEDRYLPGGKNDVKWVQDELGHGVSWLQTQSALFGPLAQLYSDDFRERFSNTDAYREFYDRLSPRALNGWEPVNRSLYMVAKSSLPNVVLTSLGDRM EMAGSLEGRPPLLDHQVIEAACRLPVNMKVRGATEKYALREAMRPYVPQAVLDRKKQYFRAPPASESPQSKLYEMINDVLSGPALNNVPFFDPRKVRALL ATLPSLSTAQRASADNLLMEIAGLCLMQKRFALN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|