Strain | Pseudomonas aeruginosa BL06 genomic scaffold adgfq-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGGCCTCGCGCCAGTGCGCGCGCAGCAGGCGATGGGCGAGGCCGTGGAAGGTGCCGACCCACATGCCCGCCGGATTGATCCCGAGCAACTGCTCGATG CGGTGGCGCATCTCCGCCGCCGCCTTGTTGGTGAAGGTCACCGACAGGATGCTGTAGGGCGAGGCGTGCTCGACCTGGATCAGCCAGGCGATCCGGTGCA CCAGCACGCGGGTCTTGCCCGAGCCGGCGCCGGCGAGGACCAGTTGGCGGCCCAGCGGCGCGGCCACGGCCTGGCGCTGCGGGTCGTTGAGGGAGTTCAG CAGGAGGGAGAGGTCGTCGTTCATCGCGGCATTCTACCGGGGCGGGGAAAAGCCGGGCAAACCGGGCCGCCATTCGGCGCAGGCCGGCGCAGCGTCGGGC CTGGCCGCGGAAAAATGCTCTATCCCGGCCTTGGGCAGCCTGCCCCTGCTCGGTTATGCTCCGGCCACTTCAAGGCAAACCACTACAAGAACAAGCGCCT
|
|
DNA Sequence for Gene |
>Q060_03255
ATGACCGTCCATGTCGAGCCCTTGGCGCTGCCGGGCGGCAGCACCGATGTACTGCGGCTCTACGCCCGCGAAATCGCCATCGAGCGTACCCGGCTCCTTT ATCTCGGCTCGCGCACGCCGACCCTGCTCATGCTGCTCGGCGGCGTGACCAGCGCCTGCCTGGTGTGGGGCAAGGTCAGCAGTTGGCTGCTCGGCGGCTG GCTGGTCTGGCTGGTGTTGCTCGCCGTCCTGCGCCTGCTGCAGGTCGCCGCCTTCCAGCAGGCCGACAGCCGTCGCCAGGCCAGCCGCCACTGGCGGCGG ACCTTCCTGTGCGGCGCCGGCGCCTCGGGCCTGACCCTGGCGTTCGCGGTGATCATGCTGGTCCCGGCCGATGCCTTCCTCCAGCAGGTGCTGGTGTTCG GCCTGGTGGCGGCGGCGATCCTCTCCGCCAGCGTCGCCTATGCGGTGAGCCTGCCGGCCTTCCTCACCTTCGCCTTGCCGGGCCTGCTGCCATCCATCGT TTTCCTGCTGTTGCAGCCGCATAGCCTGTTGCAGGGCTGGGGCGTGCTCGGCCTGATCCTGCTGGTGGCGCTGCTGGTGGTCGCCGGGCAGATCCACCGG CTGGTGCAGGGCGCGCTGCTGCGACGCTTCCAGACCCAGGCGCTGAACCTGCACCTGGAACGCGTCAATGCGGAGGCCGAAGCGCTCAATCGCAAGCTCG CCCAGGAGGTCGGCCAGCGGCGCCTGGTCGAACGCGAGCTGCGCGCCGCCCGCGACGCCTTGCAGCGCCGGGTGGAGGCGCGCACCGAGGAGCTTGGCGC GACCAGCCAGGCGCTCAGCCAGAGCGAGGCGCGCCTGGCCATGGCCCTGGAGGCCAGCGAACTGGGGTTGTGGGACTGGGACCTGGAGAGCGGCCGGGTC CAGCATTCCTATCTCGAGGCGGTCTTCAGCGACGCCGGGGGCGGTCCCGAGGACTATCGCAGGCTGATCGAAAGCATCCACCCCGGCGACCTGCCGCGCA TCCGTCGCGCCCTCGCCGAACATCTCAAGGGGCGCAGCGAGCTGTACCGGGTGGAGTACCGCGTGCGCGACCGGGAGGGCGGCTGGCGCTGGCTGGAGGA TCGTGGCCGGGCCATGGCTCGCGACCCGCGGGGACGGGTGACGCGGATGCTCGGCACGCGCAGCGACATCAGCGCGCGCAAGCGCCTGGAAGAGCAGCAG CAACTGGCCGCGACAGTGTTCGAGGCGGCCAGCGAGAGCATCGTGATCCTCGATCCGGCCTACAACCTGCTGGCGGTCAACCAGGCCTTCAGTCGCATCA CCGGCTATCGCCGCGAGGACGTGGTCGGGCGCAACGCCAGCCTGCTGGTGAATACCCCCGAGGCCCAGCGCCACTACCGGCAGATCCGCGCCGAGCTGCG CCAGCACGGGCAGTGGCAGGGCGAACTGGTGGATACGCGGAAGAATGGCGATCCCTATCCCCAATGGCTGCAGCTCAACCTGCTGCGCGACGGCAATGGC GAGGCGACCCACATCGTCGGTTTCTTCACCGATCTCAGTGCCCGCCGCGACGTCGAGGAGCGCCTGCGTCACCTGCTGCACTACGACGAACTGACCGGCC TGGCCAACCGCCGGTTGTTCCGCGAGCGGCTGCACGAGGCGGCCCAGCGGGCGCGCCAGGAGGAGGGCGGGCTGGCCCTGCTGCTGATCGACCTGGACCG CTTCAAGCTGCTCAACGACAGCCTCGGCCACGAGGTCGCCGACCAGTTGCTCAGGGAGATGGCCCAGCGCCTGCGGCGCACCGCGCCGGAAGCCAACACC CTGGCGCGTCTGGCCGGCGACGAGTTCGCCATTCTCCTCGATGGCGGCACCGGCACCGCGGCCCTGTCGCGCCTGGCCGAACGCCTGCTGGTCCAGTTGC GCCAGCCGGTGAGCGTGCTCGGCCACGAGCTGATCCTCGGCGCCTCGCTGGGGATCAGCCTGTTTTCCGAGCAGGCACGGGAAATCTCCGTGCTGATGAG CCAGGCGAACCTGGCGATGCAACATGCCAAGCAACTCGGCGGCAATACCTTCCAGTTCTTCCGCGACAACCTGCAGGACAGCACCCTCGAACGCCTGCGC CTGGAAACCCGGTTGCGCAAGGCGGTCGAGGAGGGCCAGCTGGACGTGCATTACCAGCCCAAGCTGTGCCTGGCCAGCGCCCGCCCGGACTCGGTCGAGG CGCTGGTGCGCTGGCACCATCCGGAGGAGGGCATGATCCCGCCGTCGACCTTCATCGGCCTCGCCGAGGAGTGCGGGTTGATCGGCGAGATCGGTGAATT CGTCCTGCGCCGGGCCTGCCTGCAGGCCGCCGAGTGGAGCCAGCGGGGCCTGAACCTGCGGGTCTCGGTGAACCTCTCGGTCCACCAGTTGCGCCAGGGC GACCTGCTCGACGTAGTGCGCTCGGCGCTTGCCGACAGCGGCCTGCCGGCGGCGCAACTGGAGCTGGAGTTGACCGAAAGCCAGTGGCTGGACGCCCTCG ATAGTGTCCTGGCGACCTTCCGCCAGTTGCGCGAGATGGGGGTGAAGCTATCGGTCGACGACTTCGGCACCGGCTATTCCTCGCTCAGCTACCTGAAGCG CCTGCCGCTGGACTACCTGAAGATCGACCAGTCGTTCGTCCGCGACCTGACCCAGAACAGCGAGGATGCGGCGATCATCCGGGCGATCATCGCCATGGCC CACAGCCTCGACCTGAAGGTGGTCGCCGAAGGCGTGGAAACCATCGAACAGCGGGACTTCCTGGTGGCCCAGCGTTGCGACGAGCTGCAGGGCTACCTGA TCGGCCGGCCGTTGCCGGCCCATGCCCTGGAGGAAGGTTTGCGCCAGGCTCGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACGCGATCCGGCGGAGTATGCTGTAGCACTTTCGACTCCCACGAATTAAGGACGATTCATGCGCTCGAAGCCGCTTCTTCCCGCCCTCCTGCTGGTGGGC GCCGGTCTCTCCCCGCTGGCCCAGGCCAGCAGCGACGACTCCTGCTATCCCGATTGGTCGCTGGTCGGCGGCGGTGTCTGCGATACCCTGCCGTTCCTCG CCCCGGGCAACGACACCCGCGCCAACCTGCGCCTGCTGCTGGCCGACGCCGGCCACTGGCGGCTGGTGGAGGCGCCGCCGTCGGAGGAAGAGAAGCTCGA AGGCTACGGCCTGGTACCGTTCGGCCTGTTCCGCCTGCTGCCCGGCGACGGCAGCCAGCCGCCCGCGCCGCCGGCGGCGAGCGAGGCCGAGACACCGCCG CCTGCGCCAGCGCCCTCGCCGCTCGCCGAACTGGCCCGGCAGATGGGCGCCGAAGCGCTACCGGAAAAGATCGCCGGCGCCGAATTCTTCGAGGGCGAGG
|
|
Amino Acid Sequence |
>hypothetical protein
MTVHVEPLALPGGSTDVLRLYAREIAIERTRLLYLGSRTPTLLMLLGGVTSACLVWGKVSSWLLGGWLVWLVLLAVLRLLQVAAFQQADSRRQASRHWRR TFLCGAGASGLTLAFAVIMLVPADAFLQQVLVFGLVAAAILSASVAYAVSLPAFLTFALPGLLPSIVFLLLQPHSLLQGWGVLGLILLVALLVVAGQIHR LVQGALLRRFQTQALNLHLERVNAEAEALNRKLAQEVGQRRLVERELRAARDALQRRVEARTEELGATSQALSQSEARLAMALEASELGLWDWDLESGRV QHSYLEAVFSDAGGGPEDYRRLIESIHPGDLPRIRRALAEHLKGRSELYRVEYRVRDREGGWRWLEDRGRAMARDPRGRVTRMLGTRSDISARKRLEEQQ QLAATVFEAASESIVILDPAYNLLAVNQAFSRITGYRREDVVGRNASLLVNTPEAQRHYRQIRAELRQHGQWQGELVDTRKNGDPYPQWLQLNLLRDGNG EATHIVGFFTDLSARRDVEERLRHLLHYDELTGLANRRLFRERLHEAAQRARQEEGGLALLLIDLDRFKLLNDSLGHEVADQLLREMAQRLRRTAPEANT LARLAGDEFAILLDGGTGTAALSRLAERLLVQLRQPVSVLGHELILGASLGISLFSEQAREISVLMSQANLAMQHAKQLGGNTFQFFRDNLQDSTLERLR LETRLRKAVEEGQLDVHYQPKLCLASARPDSVEALVRWHHPEEGMIPPSTFIGLAEECGLIGEIGEFVLRRACLQAAEWSQRGLNLRVSVNLSVHQLRQG DLLDVVRSALADSGLPAAQLELELTESQWLDALDSVLATFRQLREMGVKLSVDDFGTGYSSLSYLKRLPLDYLKIDQSFVRDLTQNSEDAAIIRAIIAMA HSLDLKVVAEGVETIEQRDFLVAQRCDELQGYLIGRPLPAHALEEGLRQAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|