Strain | Pseudomonas aeruginosa LES431, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCCGTCGGTGACCAGGCCGTCCATCTGCAGTTCGTCCACTGCCTGGCGGATGTCGTCGAGTTCCATCCGGTTCACGCTGCGCTTCAATTGTTCGACGTTC AGCATCTGTCTGTCCTTTCCGTATCCGTTACCGAGCATTCATCGAAGGCTGAGCTGGCTGTACGAATATACAGTTAAATGTGCGATGATGCGAGCGAACG GAGGGCGAGGCGATGCAGTGGAACAGGAGGGGCGGAATGCAAAAAGCCCCGGCGCTATCGCTAGTGCCGGGGCTTTTCGAATGTGGTTGCGGGAGCTGGA TTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGTCTGTGTGGGCGCATTCTACGGACTCTCGTCGGGCTGTCA ATCGATTTTTCGAAAAAAGTGTTTTTTCTTCAAATGCTTAGCGCTTGCCCAATGTTAGAATTCAGCGCTCCGGGGCAGGCCCGGCGGGGCTTGTAGCGAG
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DNA Sequence for Gene |
>T223_22440
ATTCCGGTGCGGAAAATCATCCATATAGACTGCGACTGTTTCTACGCCGCCCTCGAGATGCGCGACGACCCCAGCCTGCGCGGCAAGGCGCTGGCGGTTG GCGGTTCGCCGGACAAGCGCGGAGTGGTCGCCACTTGCAGCTACGAGGCGCGAGCCTATGGCGTGCGCTCGGCGATGGCCATGCGCACGGCGCTCAAGCT GTGTCCCGATCTGCTGGTGGTGCGCCCGCGTTTCGATGTCTACCGGGCGGTGTCGAAGCAGATCCATGCGATCTTCCGCGATTATACCGATCTGATCGAG CCGCTTTCGCTGGACGAGGCCTACTTGGACGTCAGCGCTTCGCCGCATTTCGCCGGTAGCGCCACGCGGATTGCCCAGGACATCCGCCGCCGGGTGGCCG AGGAGCTGCACATCACCGTTTCGGCGGGCGTCGCGCCGAACAAGTTCCTGGCCAAGATCGCCAGCGACTGGCGCAAGCCGGACGGGCTGTTCGTGATTAC CCCGGAGCAGGTCGACGGGTTCGTCGCCGAGTTGCCGGTGGCCAAGTTGCATGGCGTCGGCAAGGTCACGGCGGAGCGCCTGGCGAGGATGGGCATCCGC ACCTGCGCCGACCTGCGCCAGGGCAGCAAGCTGAGCCTGGTGCGCGAGTTCGGCAGCTTCGGCGAACGCCTGTGGGGACTGGCCCATGGTATCGACGAGC GACCGGTGGAAGTCGACAGCCGGCGCCAGTCGGTGAGCGTCGAATGTACCTTCGATCGCGACCTGCCGGACCTGGCGGCTTGCCTGGAGGAACTGCCGAC CCTGCTCGAGGAGCTGGACGGACGCCTGCAACGCCTGGATGGCAGTTATCGGCCGGACAAGCCGTTCGTTAAACTGAAGTTTCACGATTTCACCCAGACC ACGGTGGAACAGTCCGGCGCCGGGCGCGACCTGGAGAGCTACCGGCAATTGCTCGGCCAGGCCTTTGCCCGTGGCAATCGTCCGGTGCGCCTGATCGGCG TCGGCGTGCGCCTGCTCGACCTGCAGGGCGCCCACGAACAACTCAGGCTGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCTCCTCATGGCGTCAACGAAGTCGCGAGGTTCCGCGGCGACGGCTCTTCCCCTACCGGCAAGGCGCTGAAGCGGCCGAGATCCTGCAGCAGTTCCAGG CGTGCTGCACGGAGTGGGCCGCGTATGGCTTCCTGTTGTTCCACGTCGAGCGGGCGGTCGTCGCCATCGCTCACCGGACCGTGGTGACGGTCCGCGCCAC GCAGTGGGAAGCTCACCTTGAAGCCTTCGCCCAGGTAGGCGATGCGCGTGGTATCGGCGCTCACCGCATAGTCGCGATGGTAGTCCGCTGCGAGCAGGTC CTGTCCCAGCGAGTAGTCGCGGGGCGGATTGCGTACGCCCAGCAGCGGCAGGAGCGTTGCGGGCAGGTCGATGTGGCTGGTGATGCCGCGGACGGCACGG GGCGCCTGTCCGGGAATGCTCAGCACGGCGACGGTGCCGGTCTGGTAGCGATTGAACTCGGTATTGTGGCCCCAGCGCGAGCGTTCCATGAACTCTTCCC
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Amino Acid Sequence |
>DNA polymerase IV
MPVRKIIHIDCDCFYAALEMRDDPSLRGKALAVGGSPDKRGVVATCSYEARAYGVRSAMAMRTALKLCPDLLVVRPRFDVYRAVSKQIHAIFRDYTDLIE PLSLDEAYLDVSASPHFAGSATRIAQDIRRRVAEELHITVSAGVAPNKFLAKIASDWRKPDGLFVITPEQVDGFVAELPVAKLHGVGKVTAERLARMGIR TCADLRQGSKLSLVREFGSFGERLWGLAHGIDERPVEVDSRRQSVSVECTFDRDLPDLAACLEELPTLLEELDGRLQRLDGSYRPDKPFVKLKFHDFTQT TVEQSGAGRDLESYRQLLGQAFARGNRPVRLIGVGVRLLDLQGAHEQLRLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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