Strain | Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TATCTGCCGGAAATCAAGGACGGCGACAAGCGCATCCTGATGATCGACGGCGAACCGGTGCCCTACTGCCTGGCGCGCATCCCCGCCCAGGGCGAGACTC GCGGCAACCTCGCCGCCGGCGGCCGCGGCGTGGCCCAGCCGCTGAGCGAGCGCGACCGCTGGATCGCCGCCGAGGTCGGCCCGCACCTGCGCGAGCGCGG CCTGCTGTTCGTCGGCCTCGACGTGATCGGCGATTATCTGACGGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAGATCGACCAGGCCTTCGACACC CGCATCGGCGACAAGCTGATGGACGCCATCGCCGCCCAGCTGGCTGCCCGCTGAATCGCGCGGGCGGGCCTCGGTCCGCCCGCCTCGGCCCGCCCGATGC GCCACGGCGAGCGACCGCGTGTCCAAGGCGCGGAGTGCGTCATAGACTTTTCCGCCCCCCATCGGCAGACTTCGCCCCACGCCAGCCACCACGATCCGCA
|
|
DNA Sequence for Gene |
>P997_05707
ATGAACGCCGCCGTCCTCAAGTCCCCCTCCGCCGCTGCCGGCGTCCGCCCGGCGGACCGTTTGGGCTTCACCCTGTTCATCGCAGCCATCCTGCACGTCG CCCTCATCCTCGGGGTGGGCTTCTCCATGCCCGCGCCGAGCCAGATCAGCAAGACCCTGGAAATCACCCTGGCCACCTTCAAGAGCGACAAGGCGCCGGA GAAGGCCGACTACCTCGCGCAGATGAACCAGCAGGGCAGCGGAACCCTGGAGCACAAGGCCGCGCCGAAGACCACCGAGGTCGCGCCGTTCCAGGACAAC CAGGTGAAGAAAGTCGCGCCGCCGGCTACGCCGAAGCAGGCCAGGAGCGAAGAGGCGCCCAAGGCCGCGGTGACCACCACCCGCCAGCGCCAGCAGAAGG CACCGAGCAAGACCCAGGCACAGAAGGCCGAGCAGGTCGCCAAGCCGGCGCCGCATTTCGACTCAACCCAGCTGTCGGCGGAAATCGCCAGCCTCGAGGC CGACCTGGCCAAGGAGCAGCAGGCCTACGCCAAGCGCCCGCGCATCCACCGCCTGAGCGCCGCCTCGACCATGCGCGACAAGGGCGCCTGGTACAAGGAA GACTGGCGCAAGAAGATCGAACGCATCGGCAACCTCAACTACCCCGACGAGGCCCGCCGGCAGAAGCTCTACGGCAGCCTGCGGCTGCTGGTGTCGATCA ACCGCGACGGCACCATCTACGAGGTGCAGGTGCTGGAGTCTTCCGGCGAGCCGATCCTCGACCAGGCCGCCCAGCGCATCGTCCGCCTGGCCGCGCCCTA TGCGCCGTTCAGCGGCGACCTGGCCGACATCGACCGGCTGGAGATCATCCGTACCTGGCGCTTCGAACGCGGCGACCGGCTGTCCAGCAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGCCGGCAAGGCTGGCTTTCTCGCGTCCGAAGCAGGACACTAGCGGCCATGAAACAGAGCAGCCCAACCTACCTCAAGCATCATTTCCTGATCGCCATGC CGCACATGGCCGACCCCAATTTCGCCCAGACCGTGACCTACCTGGTCGAACACAACGAGCAGGGCGCCATGGGCCTGGTGATCAACCGTCCCAGCGGCCT CAACCTGGCGGAAGTCCTCGAACAGCTCAAGCCGGACGCCCTGCCGCCGGCGCGCTGCCAGCACATCGACATCTACAACGGCGGCCCGGTGCAGACCGAC CGTGGCTTCGTCCTCCACCCCAGCGGCCTGAGCTACCAGTCGACCCTGGAACTGGGCGAGCTGGCGATGTCCACCTCGCAGGACGTGCTGTTCGCCATCG CCGCCGGCACCGGCCCGGAAAAGAGCCTGATCAGCCTTGGCTATGCCGGCTGGGAAGCCGGCCAGCTGGAGGCCGAACTGAGCGACAACGCCTGGCTGAC
|
|
Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MNAAVLKSPSAAAGVRPADRLGFTLFIAAILHVALILGVGFSMPAPSQISKTLEITLATFKSDKAPEKADYLAQMNQQGSGTLEHKAAPKTTEVAPFQDN QVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAPSKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKGAWYKE DWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGEPILDQAAQRIVRLAAPYAPFSGDLADIDRLEIIRTWRFERGDRLSSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|