Strain | Pseudomonas aeruginosa CF5 genomic scaffold adgfB-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAACTCGCTGGCGCGACTCATGGCGGTGGAGATGGAATCCAGCGCCGGCGACAGGTGGGCGAAGATTTCCTGGGCTCGCGCGGTGGGTTCCATGCTGCG TCCGGTACGGACGAACAGCGGGTCGTCGAACAGCGTGCGCAGGCGCGACAGCGCGGCACTGATGGCCGGCTGGCCGAGGAACAGTTTCTCTGCGGCGCGG GTCACGCTGCGTTCGTGCATCAGAGTCTCGAACACGATCAGCAGGTTCAGATCGACGCGGCGCAGGTCGTTTCGGTTCATGGCGTTCCTCGTTTCCAGGG GCTAGAGGCTGCAACCGCGGGGGCTCGCCGTCAAGCCTTGCGTGCGAGACGGGGCGGGGCCTGGCGAGGTGCCGGAGGGGCATAGGATCACTGACAGGCA TAGCCATTATCAATAACGACGGGTGGTTTTGTCAGGCATGGGCGGATACAGTCACAACCCATGAGGTTATTCACCCCGTGATGCACTGCAGAGGTTTGCG
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DNA Sequence for Gene |
>Q004_01861
ATGTCCCGAGTGATCCGTTTTCATCAGTTTGGCCCGCCAGAGGTCCTCAAATGCGAAGAGCTGCCGACCCCGGCGCCGGCCGCAGGGGAAGTCCTGGTGC GTGTCCAGGCGATCGGCGTGAGCTGGAAGGATGTGCTCTGGCGTCAGAACCTGGCCCCGGAGCAGGCTGCGCTGCCGTCCGGTCTCGGCTTCGAACTGGC CGGCGAGGTGCTGGCGGTCGGCGCCGGCGTCGGCGACCTGCCGCTGGGTTCCCGCGTGGCCAGTTTCCCCGCCCATACCCCCGATCATTATCCGGCCTAT GGCGACGTGGTGCTGATGCCGCGCGCGGCCCTGGCGGTCTACCCCGAGGTACTCACCCCGGTGGAGGCCAGCGTCTACTACACCGGCCTGCTGGTGGCCT ATTTCGGCCTGGTCGACCTGGCCGGGTTGAAGGCTGGGCAGACCGTGCTGATCACCGAGGCGGCGCGCATGTACGGGCCGGTCTCGATCCAGTTGGCCAA GGCTCTCGGCGCGCGGGTGATCGCTTCCACCAAGTCCGCCGAGGAGCGCGAGTTCCTCCGCGAGCAGGGCGCCGACAAGGTGGTGGTGACCGACGAGCAG GGCCTGGTCCTGGAAGTCGAGCGCTTCACCGAGGGCAAGGGCGTCAACGTCATCCTCGACGAACTGGGCGGCCCGCAGATGACCCTGCTCGGCGATGTCT CCGCCACCCGCGGCAAGCTGGTGCTGTATGGCTGCAACGGCGGCAACGAGTCGGCGTTCCCGGCCTGCGCCGCGTTCAAGAAGCACCTGCAGTTCTATCG CCACTGCCTGATGGATTTCACCGGTCATCCGGAGATGGGCCTGGAACGCAACGACGAGTCGGTGAGCAAGGCCCTCGCGCACATCGAGCAACTGACCCGC GATCGCCTGCTCAAACCGGTGGTCGACCGGGTATTCGAGTTCGACCAGGTGGTCGAGGCGCACCGCTACATGGAAACCTGTCCGAAGCGCGGCCGGGTGG TGATCCACGTCGCCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGACGACCCGCAGCGAAAGAGCCCGGCCATCGAGCCGGGCTTTTTCGTGGGCGCGGTTTCAGATCCACAGATCGTTGACCGCCGTCCGCTCGCCGCCCTG GTCGCCGGTATTGCGCACGCCGCGGGGCTCCACCAGGAGCATGCGCACCTCGCCCTCGGCGAACGGCTTGTGCTCCACGCCGCGCGGCACCACATACATC TCGCCGGGGCCCAGGTGCACCGCGCCGTCGCGGAAATCGATGCGCAGGCGACCGGCGAGGACGATGAAGGTCTCGTCGGTGTCGGCGTGGCTGTGCCAGA CGAAGTCGCCTTCGATCTTCACCAGCTTGAACTGGTAGTCGTTCATCTGGGCGATCACCCTGGGTTGCCAGCGGTCGTCGAACAGGGCGAGCTTGGCGGC GAAGTTGATCGCTTGGGTTGTGCTGGTGGACATCGGTGCGCTCCGGTGGTTGGTCTCTGGCGCCAGGGTAGGCGGCTACGGAGCGGGCGGTCTTGGATGA
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Amino Acid Sequence |
>oxidoreductase
MSRVIRFHQFGPPEVLKCEELPTPAPAAGEVLVRVQAIGVSWKDVLWRQNLAPEQAALPSGLGFELAGEVLAVGAGVGDLPLGSRVASFPAHTPDHYPAY GDVVLMPRAALAVYPEVLTPVEASVYYTGLLVAYFGLVDLAGLKAGQTVLITEAARMYGPVSIQLAKALGARVIASTKSAEEREFLREQGADKVVVTDEQ GLVLEVERFTEGKGVNVILDELGGPQMTLLGDVSATRGKLVLYGCNGGNESAFPACAAFKKHLQFYRHCLMDFTGHPEMGLERNDESVSKALAHIEQLTR DRLLKPVVDRVFEFDQVVEAHRYMETCPKRGRVVIHVAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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