Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACGACATCCTCCAGGGGGGGCTTGCCCTCACCAGCGGCAACTACCAGCTCAACTACCAGGGCAACCTGCTGAGCATCCTGCCGCTGCCGGTCACGCCGG GCGACCTGGGGCAACTGGCAGCGCTCTCCGACTTGCGCGAACTGCAGAAGGGGCGCGATCCGGATACCCCCGGGGATGCGGTCTACCGCACCACCACGCT GGAAAACCCGTTCCTCGAAAACCCGTTCCTGCGCGCCTACGCTCTGGGTATGGACGTCAGCGATCCGAACCTGCTGCCGGCTACCGCCGCGGGGCCGGCA GAGGACGCCAGCGCCAAGCGGGTGGGGCAGTTCACCGATCGTCCGCTCAGGGCAGAGGCCGAGAGTGGGGCGGGTTGCTCGAACCAGAGCTACCTGGCCG ACTACTGGAGCTGCTTCAACAAGCCTCTGAATTTCTAACCCTTTTCGCAATGCGCACTATCGTCTCCGGGCGGTAGTGCGTCATCTGCCCGAGGTGAATG
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DNA Sequence for Gene |
>Q010_04116
ATGAAACCTTCGCAATGGACGCTTCGCTGGGTGACGCTCTGTGGCTGCGGGATGCTGGCAGCTTCCGCCGCCGCCGTGGAGTTGCCAGGGACTGTACAGC CATCCCAGCTCGATGAACGCTTCAAGCCCCGCAGCGAGCCGCAGGCCAAGCCCGAGGCGCCGCTGGTGGTGCCCAAGCAGGTCGCGCCGCAAGGCAGCGA ACAGATCCGCTTCGAACTGCGCGAGATACGCATCGAAGGCAACACCCGCTATGACAAGGCGGTGCTCGAGTCCTATTACCAGCATATGCTCGGCAAGCAG GTGTCCCTGGCCGAACTGGTCGACCTGGCCAACCGCCTCACCGCCAAGTACCGCCAGGACGGCTACCTGTTGACCCAGGTAGTGGTGCCGGAGCAGAGCA TCGAGGGCGGCAAGGTACGCCTGCAGGTGATCGAGGGTTACCTCGAACACGTGCAGATCAAGGGAACCGTCGATGGGCCGCGGGTGCGGGTGGAGGAACT GCTCGCACCGCTGACCGAAAAACGTCCGCTGGATGCCGATACCCTGGAGCGCGGCCTGCTGCTGGTCGGCGACCTGCCGGGGGTCAACGTGCAGAGCGTG CTCAGCCCGGGTCAGGCGCTGGGCTCGTCGAACCTCGACGTGGCCTTGCAGCAGCAGCGATACGAAGGCTTCGTCAGCCTCGACAACCGCGGTTCGCACT ACACCGACCCGACCACCCTGGCCTTCGGCGCCACCGAGTTCTCCCGCCTGGGCTTCTACGAGCAGATCGACGTGCTCGGTGCGATCTCGCCGTTCAGCGA TGCCACCCGCTACATCCAGTTGCGCGGCACGTTGCCGCTGGGCGGCATGTTCGCCGGCGATACCCTGCAGATCATGGGTTCCTATTCGAAGGTCAACCCG GACATCCCGGACTCGGTATTCCCCTTCGACAGCGTCAGCAAGAGCACCGAAGGCAGCATTTCCTACAACCATCCCTTCATCCGCTCGCGCTCGCAGAACC TGAGCGGCGGCCTGGCGTTGCAGTGGAAGGATACCGAGACCCGCCTGCGCGACTTCGCCAGCGACGCCTCGAACCCCGGTCGTGACCATGTGCGGGTGTT CCAGCAACGCCTGACCTATGACTGGGTCGATCGCTGGATGGGCATCAACCTGGCGGAGGTGCGCAACAACATCGGCCTGGACATGTGGGGCGCGACCAAG AAGGACGATGAACGTCGTTCCCGCGAAGTGGCCGACGGACGTTTCGTCTATCTCAACGGCAACGTCGGGCGCCTGCAAGGGCTCGGCGGACCCTGGTCGG TGTATGGCGAGTTGCAATGGCAGTACAGCTTCGACCCGCTGCTGCCGAGCGAGCGCTTCGGCGTCGGCGGCAGCGGGATCGGTCGCGGCTTCGCCCCGGG CAACATCACCGGTGACCGTGGCTTCGCCCTGAAGCTCGAACCGCGCTATGGCCAGGCGGTGGGCTATAGCTGGCTGCGCAGCTACCAGGCCTACGCTTTC TACGACTGGGGCAAGACCTACAACCTCGACGTGGACGATGACGAGCAGCAGAAGCTCGGCTCGATCGGTGCCGGGGTGCGCTTCAACCTCACCGACCAGT TGTCGTTCAACCCGGAGATTGCCCGCCAGGTCATCGGCGAGCCAGCCGACCAGCGCGATGGGAAGCGCGAGACGCGGGTCCTGTTCAACGTGGTGGCGCG CTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCCTGCCGGCCTCCGTTCCGGAGGCTGCTGGCGGAGCCCCTCTCCGGTTCTGCGGAGAGGGAGGTCCGTGCTCAATTCCGAGTGTTTTTCTCAAACTTT CGATTTCTTCGATTTTTCATATCGATGCCGTCAATCCGTGCCGAGGCCGGTCGGAGAGGTGTATTCTTGCTGTAACTCCTGTGCTAGAGCGGTTCTTCGC ACTATTTCAAACGTCGATGAATACTATTGGCGCGCTTCGTTTTCCAATCGAGTTTCCCGAACAGAGAATGGCCCCACGTAACGAATACCTGGAGCCACTG CCATGAAACGCCCGCTGATTCTCGCCATCGCCCTTGCTACCCTGACCGCCAATGCCGCCTTCGCCGCACCGCGGGTCGAATCCATCGCCCTGCGCGGTGC CCAACAACTGATCGCCTCCGACGGTTCCGACCGTACCCTCGAACGCCTGCGCAAGACCCAGGCGCCGCGCGTCCAGGAAGAACGCCGGGTCGCCGAAAGC
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Amino Acid Sequence |
>hemolysin activation/secretion protein
MKPSQWTLRWVTLCGCGMLAASAAAVELPGTVQPSQLDERFKPRSEPQAKPEAPLVVPKQVAPQGSEQIRFELREIRIEGNTRYDKAVLESYYQHMLGKQ VSLAELVDLANRLTAKYRQDGYLLTQVVVPEQSIEGGKVRLQVIEGYLEHVQIKGTVDGPRVRVEELLAPLTEKRPLDADTLERGLLLVGDLPGVNVQSV LSPGQALGSSNLDVALQQQRYEGFVSLDNRGSHYTDPTTLAFGATEFSRLGFYEQIDVLGAISPFSDATRYIQLRGTLPLGGMFAGDTLQIMGSYSKVNP DIPDSVFPFDSVSKSTEGSISYNHPFIRSRSQNLSGGLALQWKDTETRLRDFASDASNPGRDHVRVFQQRLTYDWVDRWMGINLAEVRNNIGLDMWGATK KDDERRSREVADGRFVYLNGNVGRLQGLGGPWSVYGELQWQYSFDPLLPSERFGVGGSGIGRGFAPGNITGDRGFALKLEPRYGQAVGYSWLRSYQAYAF YDWGKTYNLDVDDDEQQKLGSIGAGVRFNLTDQLSFNPEIARQVIGEPADQRDGKRETRVLFNVVARF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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