Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCACGTTGACCCGCGGGTGGCGTTCGCGAAAGGTCTTCAAGACCAGCGGCAGCAGGTTGCCGGCGAAGGAGGGCATGGCGGCGATGGAGACCTTGCCC AGTTGCAGGGTGAAGTGCTGGCGCAGCAATTCCTCGGTATTGTCCCAGTCGGCCAGCAGGCGCAGCGCCAGCGGCAGCAGGGTCTCGCCCTCGGGGGTGA GGCTGACGCTGCGGGTGGTACGTTCCAGCAGCGGACCGCCGAGGCTTTCCTCCAGGCTCTTGATCGCCAGGCTCAGGGCCGGCTGGGAGAGGTGCAGGCG TTCGCCGGCCTGGGCGAAGCTGAGGCTCTGCGCCACGGCGAGGAAGGCGCGCAACTGCTTGACGGTCATTTATTTGTTTTTCTCATCAATGGATTGGAAA AACAAACTTAACAAATCAGTCCGCAGCGGAGAAGCTCTGTGCGACCCGGCAGTCAGACTGCCGCACGCACAATCACAAGAGCCGGAAGAGGCACAGCAGC
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DNA Sequence for Gene |
>Q010_02498
ATGAGCGGACTCGACAAGCGAGTAGGCAGTTACGAAGAGGCCCTCGAAGGCCTGACCGACGGCATGACCGTCCTCGCCGGGGGCTTCGGCCTCTGCGGGA TTCCCGAGAACCTGATCGCGGAAATCCGCCGGCGCGGGGTCAGGGACCTCACGGTGGTCTCGAACAACTGCGGCGTCGACGGTTTCGGCCTCGGCGTGCT GCTGGAAGACCGGCAGATCCGCAAGATGATCGCCTCCTACGTCGGCGAGAACGCCCTGTTCGAGCAACAACTGCTCAGTGGCGAGCTGGAAGTCGAACTG ACCCCGCAAGGCTCGCTGGCCGAGAAGATCCGCGCCGGCGGCGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCTACGGCACCCCGGTCGCCGAGGGCA AGGAGGCGCGCGAGTTCAATGGCCGCCACTACATCCTCGAACCGGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCATTTCGGCAA CGTCGTCTATCGCCACACCGCGCAGAACTTCAATCCGCTGGTCGCCACCGCCGGGCGCATCACGGTGGTCGAGGTGGAGGAGATCGTCGAGCCCGGCGAA CTGGACCCGACGCAGATCCACACCCCCGGCATCTACGTCGACCGGATCATCCAGGGTCGCTTCGAGAAACGCATCGAGAAACGCACGCTGCGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGCGGCCGCTACAACGACAAGAGGTTTCCCCAGATGGCACTTACCCGCGAACAGATGGCGCAGCGCGTGGCGCGCGAATTGAAGGACGGCTATTACGTC AACCTCGGCATCGGTATCCCGACCCTGGTGGCCAACTACGTGCCGGAGGGCATCGACGTCATGCTCCAGTCGGAGAACGGCCTGCTCGGCATGGGCGCGT TTCCCAGCGAGGCGGAAGTCGACGCCGACATGATCAACGCCGGCAAGCAGACCGTGACCGCCCGCGTCGGCGCGTCGATCTTCGACTCGGCGCAGTCCTT CGCCATGATCCGTGGCGGCCACGTCGACCTCACCGTACTCGGTGCCTTCGAGGTGGACGTGCGCGGCAACATCGCCTCCTGGATGATCCCCGGCAAGCTG GTCAAGGGCATGGGCGGCGCCATGGACCTGGTGGCCGGCGCCGAGAACATCATCGTCACCATGACCCACGCCTCCAAGGACGGCGAGTCCAAGCTGCTGC
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Amino Acid Sequence |
>succinyl-CoA:3-ketoacid-CoA transferase
MSGLDKRVGSYEEALEGLTDGMTVLAGGFGLCGIPENLIAEIRRRGVRDLTVVSNNCGVDGFGLGVLLEDRQIRKMIASYVGENALFEQQLLSGELEVEL TPQGSLAEKIRAGGAGIPAFFTATGYGTPVAEGKEAREFNGRHYILEPAITGDFAIVKGWKADHFGNVVYRHTAQNFNPLVATAGRITVVEVEEIVEPGE LDPTQIHTPGIYVDRIIQGRFEKRIEKRTLRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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