Strain | Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTGCGCGATCTGCCGACCAGCGTTGCCGGGGAAGGTAGCGCGACGACCTGGGCGGCCCTGCCGGACGCGCCTGCTCAGTTGGGAACGGTGCTGCCCGCCG AGCGACCGCTGCGCGCCGTGCGCGAGCAGGACGGCCAGTTGGCCATCGGCTGGCGGCTGGCGCCGTCGGTGCGTTTCGATCGGGTCGCAGTGGACGCCTG GCTGAGCCGTTTGTCCGGACTGCGGCGGGCCAAGGCGGTGCTGCATTGCGCGGACGGTTGGTATGCAGCGAATGCCGCGCCGTTTGTGGATAACTGGGGC AAGTCCTCGTGGCGACGGGATAATCGGCTGGAACTGATCCTCGCCGCAGGCGCGGATGAAGAGGCGCTCGAAGAGGCGTTCCTGGCGTGTCGGATGGTCG CGGAATGATCCGCCAAGGTTGCCCTGAGGACGCGACTGAATGATAATAATTATCAGAAGACTCTACTTCCTTACCTTTCACTTCTCCGCAGGTCGCCCTC
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DNA Sequence for Gene |
>Q011_06077
ATGTCGCCACAGCCTTCACGGTCGCCTGACCGTTTTTCGCTGGCCGCGCTCGCCGAAGACCATCCCACCGCTCCTGCCCAGGGAGACGAAAGCGAGTCCC TGCCATGCGTGAATGCCCAGCGCGGAGAACCCAACCTGCGCGTGGTGGACTGCTCCGGTGCGCGCCGCGACGAGGAAGTGGCGGTCGAGGAAGTGCTGAT CCCCTACGCCCATGGCAGCGATCCCGAAGACGTCCCCGGCGAGCCGCCCAAGTCGCGCTGGTGGTTGTCCTCCGGCGCAGCGGTGGCGATGCATGTGGCG ATCATCGGTGCGCTGGTGTGGGTGATGCCGACCCCGGCCGAACTCAACCTTGGCCACGGCGAACTGCCGAAGACCATGCAGGTGAATTTCGTCCAGCTCG AGAAGAAGGCCGAGCCGACCCCGCAGCCGCCGGCTGCCGCGCCGGAACCGACGCCGCCGAAGATCGAGGAACCCAAGCCGGAGCCGCCGAAGCCGAAGCC GGTGGAAAAACCCAAGCCCAAGCCGAAACCCAAGCCCAAACCGGTGGAAAACGCCATTCCCAAGGCCAAGCCGAAGCCGGAACCCAAACCCAAGCCGGAA CCCGAGCCGAGCACGGAAGCATCCAGCCAGCCCAGCCCGTCCAGCGCCGCGCCGCCGCCCGCGCCTACCGTCGGGCAGAGCACGCCCGGCGCGCAGACTG CGCCCAGCGGCTCGCAAGGCCCGGCCGGCCTGCCCAGCGGCAGCCTCAACGACAGCGACATCAAGCCGCTGCGCATGGATCCTCCGGTCTATCCGCGGAT GGCCCAGGCGCGGGGTATCGAAGGCCGGGTGAAGGTGCTGTTCACCATCACCAGCGATGGCCGCATTGACGACATCCAGGTGCTGGAGTCGGTGCCGTCG CGCATGTTCGACCGCGAAGTGCGCCAGGCCATGGCCAAGTGGCGTTTCGAGCCGCGTGTCAGCGGTGGCAAGATCGTCGCCCGCCAGGCGACCAAGATGT TCTTCTTCAAGATCGAGAAGCGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGGTTCGCCGACAACGAAAAGAGCCGCGCCTTCGAGCGCGGTTTTTTTATTCCCGGTAGGTCTCGCAGACGGGGCCTCGCTGCCTGGGGACGGCAGGC CCCTTGCGCTGTTCCGCCGTGGGAACGCGAGGAGATCGGCGTTTACGCGCCAAGGTTCCAGCCCCGCCGGAATGACGAGCCGCAGGGTGAATAACCGCTT GCGGTTATCCGCCGTGGAACGCAGGGGCACCGGCGGATTACTCCGCCGGCGTTGCGCGCCCTAGGGTTCCGGTCGGGATGCCGTGCCGTGGACCAACAGC CGGCGGGTGTGGGGAAATCGGTTGCCGCGCCAAAAAGCAGGACGGCGACCCGAAGGTCGCCGTCCTGTGGATAAAAAGGCCCGGAGTGTGTCGGGGCCAT GAGCACGAGGCTCAATCAATCGGTCGTGATCTTCGAGTGCTTCTGGGTGTCCTTCATGAACACATAGACCAGCAGCGAGCAGGCGATGCAGGCGGTGACG
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Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MSPQPSRSPDRFSLAALAEDHPTAPAQGDESESLPCVNAQRGEPNLRVVDCSGARRDEEVAVEEVLIPYAHGSDPEDVPGEPPKSRWWLSSGAAVAMHVA IIGALVWVMPTPAELNLGHGELPKTMQVNFVQLEKKAEPTPQPPAAAPEPTPPKIEEPKPEPPKPKPVEKPKPKPKPKPKPVENAIPKAKPKPEPKPKPE PEPSTEASSQPSPSSAAPPPAPTVGQSTPGAQTAPSGSQGPAGLPSGSLNDSDIKPLRMDPPVYPRMAQARGIEGRVKVLFTITSDGRIDDIQVLESVPS RMFDREVRQAMAKWRFEPRVSGGKIVARQATKMFFFKIEKRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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