Pseudomonas aeruginosa PAO1, PA5443 (uvrD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCCGGCGCCGCACAGGAAGGTCCGCCGCCAGTGGCGGCTGGCCTGGCGACGGCTATCGGCCTGCTGGAAGGCGGCGACCTGCAGCAGGCGCAGGACG GCGAGCAACACCAGCCAGACCAGCCAGCCGCCGAGCAGCCAACTGCTGACCTTGCCCCACACCAGGCAGGCGCTGGTCACGCCGCCGAGCAGCATGAGCA GGGTCGGCGTGCGCGAGCCGAGATAAAGGAGCCGGGTACGCTCGATGGCGATTTCGCGGGCGTAGAGCCGCAGTACATCGGTGCTGCCGCCCGGCAGCGC CAAGGGCTCGACATGGACGGTCATAGGCGCTTGTTCTTGTAGTGGTTTGCCTTGAAGTGGCCGGAGCATAACCGAGCAGGGGCAGGCTGCCCAAGGCCGG GATAGAGCATTTTTCCGCAGCCAGGCCCGACGCTGCGCCGGCCTGCGCCGAATGGCGGCCCGGTTTGCCCGGCTTTTCCCCGCCCCGGTAGAATGCCGCG
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| DNA Sequence for Gene |
>PA5443
|uvrD
ATGAACGACGACCTCTCCCTCCTGCTGAACTCCCTCAACGACCCGCAGCGCCAGGCCGTGGCCGCGCCGCTGGGCCGCCAACTGGTCCTCGCCGGCGCCG GCTCGGGCAAGACCCGCGTGCTGGTGCACCGGATCGCCTGGCTGATCCAGGTCGAGCACGCCTCGCCCTACAGCATCCTGTCGGTGACCTTCACCAACAA GGCGGCGGCGGAGATGCGCCACCGCATCGAGCAGTTGCTCGGGATCAATCCGGCGGGCATGTGGGTCGGCACCTTCCACGGCCTCGCCCATCGCCTGCTG CGCGCGCACTGGCGCGAGGCCGGGCTGAGCGAGAACTTCCAGATCCTCGACAGCGACGACCAGCAACGCCTGGTCAAGCGGGTGATCCGCGAACTCGGCC TCGACGAGCAGCGCTGGCCGGCGCGCCAGGCCCAGTGGTTCATCAACGGGCAGAAGGACGAGGGCCTGCGGCCGCAACACATCCAGCCCGGCGGCGACCT GTTCCTCGCCACCATGCTGAAGATCTACGAAGCCTACGAGGCGGCCTGCGCCCGCGCCGGGGTGATCGACTTCTCCGAGCTGCTGCTGCGCGCCCTGGAC CTCTGGCGCGACCATCCCGGCGTGCTCGAGCACTACCAGCGGCGCTTCCGCCATATCCTGGTGGACGAGTTCCAGGACACCAACGCCGTGCAATACGCCT GGCTGCGGATTCTCGCCAAGGGCGGCGACAGCCTGATGGTGGTCGGCGACGACGACCAGTCGATCTACGGCTGGCGTGGCGCACGGATCGAGAACATCCA GCAGTTCAGCGACGACTTCGCCGATGCCGAGGTGATCCGCCTGGAGCAGAACTACCGTTCCACCGCGTCGATCCTCAAGGCCGCCAACGCCCTGATCGCC AACAACCAGGGACGCCTGGGCAAGGAGTTGTGGACCGACGGCGAGGACGGCGAGTCGCTGAGCCTGTACGCCGCGTTCAACGAGCACGACGAGGCGCGCT ACGTGGTCGAGTCGATCGAGAGCGCGCTCAAGGGCGGCCTGGCGCGCAGCGAGATCGCCATCCTCTACCGCTCCAACGCCCAGTCGCGGGTGCTGGAGGA AGCCCTGCTGCGGGAGAAGATTCCCTACCGCATCTACGGCGGCCAGCGCTTCTTCGAGCGTGCCGAGATCAAGAACGCCATGGCCTACCTGCGCCTGCTC GACGGCCGCGGCAACGACGCGGCGCTGGAACGGGTGGTCAACGTGCCGGCACGCGGCATCGGCGAGAAGACCGTGGAGAGCATCCGCGAATTCGCCCGCG GCAACGATGTGTCGATGTGGGAGGCGATCCGCCTGATGATCGCCAACAAGGTCCTGCCCGGCCGCGCCGCCAGCGCCCTGACCGGCTTCGTCGAGCTGAT CGAGAATCTTTCGGCGAAGGTCATGGACATGCCGCTGCACCTGATGACCCAGACGGTGATCGAGCAGTCCGGACTGATCAGCTACCACAAGGAAGAAAAA GGCGAGAAAGGCCAGGCCCGGGTGGAGAACCTCGAGGAACTGGTCAGCGCCGCCCGCGCCTTCGAGAACAGCGAGGAAGAGGAAGACCTCACCCCGCTGC AGGCCTTCCTCAGCCACGCCTCCCTGGAGGCCGGGGAAACCCAGGCCGACGCCCACGAGGACAGTGTCCAGCTGATGACCCTGCACAGCGCCAAGGGCCT GGAGTTCCCGCTGGTGTTCCTGGTCGGCATGGAGGAAGGGCTGTTCCCGCACAAGATGAGCCTGGAGGAATCCGGCCGCCTGGAAGAGGAACGCCGCCTG GCCTACGTCGGCGTCACCCGCGCCATGCAGCGACTGGTCCTGACCTACGCGGAGACCCGCCGGCTCTACGGTAGCGAGACCTACAACAAGGTTTCGCGCT TCATCCGCGAGATCCCGCCGGCGCTGATCCAGGAAGTGCGCCTGTCCAATACCGTCAGCCGCCCCTACGGCGGCACCTCGCGCAGTGCCGGCGGCAACCT CTTCAGCGGCGCCGGGGTGCCGGAGACGCCCTTCTCCCTCGGCCAGCGGGTGCGCCACGCGCTGTTCGGCGAAGGGACTATCCTCAACTTCGAAGGCGCC GGCGCCCAGGCCCGGGTGCAGGTGAATTTCGAGAGCGAAGGCAGCAAGTGGCTGATGCTCGGCTACGCCAAGCTGGAAGCCCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCGCAGCCCGTGGAGAAGGCCCGGAGGAGGACGACATGCTGGCATCCTGGGCCTTCTGGGCACTGCTTTCGGCGCTGTTCGCCGCGCTGACCGCGATC TTCGCCAAGATCGGCCTCGACCGGGTCGATTCGGACTTCGCCACCTTCATCCGCACCCTGGTGATCCTCGTCACCCTCGGCGGCATCCTCGCGGTCCTGG GCAAGTTCCAGGCCCCGGGCAGCATCCTGCCGCGCAGCTGGCTGTTCCTGGTGCTCTCCGGGCTGGCCACCGGTGCCTCCTGGATCTGCTATTTCCGCGC CCTCAAGCTCGGCCCGGCGTCGCTGGTGGCGCCGCTGGACAAGTTCAGCGTGGTGCTGGTGGCACTGCTCGGCGTGGCCTTCCTCGGCGAACGCCTGGAC CTGCGCCAATGGCTCGGCGTAGCCCTGGTGACAGCGGGCGTGGTGGTCCTGGCAATCCGCCCATAAGCCCGCTGAATGGCGCTTCGACCTTGGTATAAAG
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| Amino Acid Sequence |
>UvrD helicase
MNDDLSLLLNSLNDPQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPYSILSVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLL RAHWREAGLSENFQILDSDDQQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQPGGDLFLATMLKIYEAYEAACARAGVIDFSELLLRALD LWRDHPGVLEHYQRRFRHILVDEFQDTNAVQYAWLRILAKGGDSLMVVGDDDQSIYGWRGARIENIQQFSDDFADAEVIRLEQNYRSTASILKAANALIA NNQGRLGKELWTDGEDGESLSLYAAFNEHDEARYVVESIESALKGGLARSEIAILYRSNAQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLL DGRGNDAALERVVNVPARGIGEKTVESIREFARGNDVSMWEAIRLMIANKVLPGRAASALTGFVELIENLSAKVMDMPLHLMTQTVIEQSGLISYHKEEK GEKGQARVENLEELVSAARAFENSEEEEDLTPLQAFLSHASLEAGETQADAHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEERRL AYVGVTRAMQRLVLTYAETRRLYGSETYNKVSRFIREIPPALIQEVRLSNTVSRPYGGTSRSAGGNLFSGAGVPETPFSLGQRVRHALFGEGTILNFEGA GAQARVQVNFESEGSKWLMLGYAKLEAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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