Strain | Pseudomonas aeruginosa BWHPSA011 genomic scaffold adgfg-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTCCGTTCCTGCCGCTGCCGCCCGTATTCCGCCTGGAGCCGGGACGCCAGCGCAGCCTGCGCCTGCTGGCTACCGGCCAGGCCCAGGCACGGGATCGCG AATCGCTGTACTGGCTGAACATCTACGAGATCCCCCCGCAAGCCACCGCCGAGGCCGCTGGCCGGCCCCGGCTCACGGTCACCCTGCGAACCCAGATGAA GGTGCTGTACCGCCCGCACGGCCTGCATCCGCACGCCGAGGACGCGGCCGCCGAACTGGGCTTCGCGCTGCGCGACGAGACCCTGCGGGTGGACAACCCG ACGCCGTACTTCGTGTCCCTGGCGGGGCTGGCGCTGGAGATAGGGGAGACGCGCCTGGATCTGCCCGGAACGCTGCTGGCTCCGCGCTCGCAACGACGCC TCGGCCTGCCGCGGCGGGTGGACGGCGGGACGCGCGGCGAGGTGGCGTTCGACTGGATCGACGACAACGGCGTCAGCCGCCAGGAAAGGAAAGCTCTACA
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DNA Sequence for Gene |
>Q024_02145
GTGAACAGTTCCCCACAGGCTCGCCAGCACGAGCACCCACCGGCCGTTGCCGCCTCCCTGGCCGGCGACCTGCGCCTCGCCCGGCGTTTCCAGGCCGCCC TGGCGCGCGGTCGGGTGCGCCTGGACTGGCAGGCCGTACGGCATGCCGGGCATCCGGAATGGGAGCCGCTCTACCGGGAAACCCTGCTCAGGGTCACGGC CGCCAGCGGCGAGCCGCCGTTGCCGACCCAGGAACTGATCCTGGCGCTGGAGCGGCTCGGCCTGGTACGCCTGCTCGATCGCTGCGTGCTGGGTACAGTC CTCGACCGGCTGAACGCCGAGCCTACCTTGCGCCTGGCCTGCAACCTGTCGCGCCAGAGCGCGGCGATGGATGCCTGGTGGGAAGCCGTCTGCCGATGGC TGGCCGCCCGTCCGCAGGTGGCACGGAGGCTGACGCTGGAGCTGACCGAGACCGCCGTGGGCGAGAGAGTCGCGACCCGGGAGTTCATCCGACGCCTGCG CGAACATGGCGTGCGCATCGCGATAGACGACTTCGGCGCGGCGCACAACAACCTGGACTTCGTTCTCGATGCCCGTCCCGATGTGATCAAGATCGATTGC CGGTATACCCGCGAAGCACGTCGCTCGGCGAAGGGCGTCGAAGTGCTGCGCCATCTGCTGGCCCTGTGCCGCGAACTGGCGCCCTGCGTGGTCCTGGAAG GTCTCGAGGAGGACGATGCGTTCGCCCGGCTGCCGACCGGGGACGTCTATCTCCAGGGCAACGCGATCGCGCCGCCGATGCGGGTCGAACCGCCGCTGTC CGTACGCCGGCCGAAGAGCCGGGCGCGGATCGAGGCGCTGGCGAGCCGCCAGGGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGGGAGGGCGCCCGGCCTGGCACGGTCGGCGAAAAATCTGAACGGTCGGCCGGCGGCGCCGTCACAGCAGCGACGATGCCGAGGTGCGTTGTGCCGAA GTCCCGGCATTTTTTCCCTGTCACGCCAACGGAGTCGACCATGAACAGAGCAATCAGCCTTCCCCTCAAGGGAGCCGCCTGGCTCCTGCTGGTCCTGGCC CTGCCTTTCGCCAACGCCCAGGACATGAACAAGACCGCGCCACAGACCTTCGTCAGCGAGGCCTCGGCGGCCGGCGTAGCGGAAATCGAAGCCGGCAAGA TGGCGCTGGAAAAGAGCACCGCCGCCGATGTGAAGGTATTCGCCAAGCAGATGATCGACGACCACGGCAAGGTCAACGCCGAACTGCGCAGCCTGGCCGA GCGCAAGAAACTGGAGGTCGAAGACGACGCCAGCCTGACCGACAAGGCCAAGGCGACCCTGCTCGACCTGCGCGACGCCTCCTTCGACCCGGCCTACGCC
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Amino Acid Sequence |
>diguanylate phosphodiesterase
MNSSPQARQHEHPPAVAASLAGDLRLARRFQAALARGRVRLDWQAVRHAGHPEWEPLYRETLLRVTAASGEPPLPTQELILALERLGLVRLLDRCVLGTV LDRLNAEPTLRLACNLSRQSAAMDAWWEAVCRWLAARPQVARRLTLELTETAVGERVATREFIRRLREHGVRIAIDDFGAAHNNLDFVLDARPDVIKIDC RYTREARRSAKGVEVLRHLLALCRELAPCVVLEGLEEDDAFARLPTGDVYLQGNAIAPPMRVEPPLSVRRPKSRARIEALASRQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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