Pseudomonas aeruginosa PAO1, PA4195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGTGGATTTCATCGAGAAACCCTACAACGAACAATTGCTGCTCGACAGCGTGCAGCAGGCCCTCGATCGCCACGCCCGTCGGCGCCGGCACCACGATC TCGACGCCGGGTTGCACGAACGCCTGGACAGCCTCACCCCGCGCGAGCGCGACGTGCTCTTGCCGCTGGTGCGCGGCTATACCAGCCGCGAGGTGGCCGA GCAACTGGAAGTCAGCGTGAAGACCGTCGACCTCTACCGCGCGCGGGTGATGAAGCGCATGCAGGCCCAGACCCTGCCGGAGCTGGTGGGCATGGCCATC GCCGCCGGGCTGGTGGACCCGCTGCGCTTGCGCGAGGGCACCTGAGCGCGCGCGGGCCCTGGCGCGGGGCGGGAAGTGGCATAGTTTGATATCTCATATG GTTATATGAAAACCATATTTCACCGGATGTTTGGTTATTAATAGACTGCGGCCCACCCGGCGCCCGACGTCGAACCCCATTCCTCCGCGAGATACCCATC
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| DNA Sequence for Gene |
>PA4195
ATGAAGATTCGCCTGCTTGGCGCAGCCTTGGCGGCTGTGTTCACCCTGATCGGCAGCGCTGCCCATGCCGACGACCTGGCCGACATCCGCAAAAAGGGCG AGATCGTCATCGGCACCCTTGGCACCGACGAGCCGAACAGCTTCATCGACCCGAAGACCCGTCAGATCATCGGCTACGAGGTCGATCTTGGTACCGAGAT CGCCAAGGCCATCGGGGTCAAGCCGGTGTTCAAGCAGATTTCCGTGGCGGCGCGTATCCCGGAGTTGCAGCAGGGCCACGTGGACCTGCTCGCCGCCTCG CTGACCCACAACAAGGAGCGCGAGGCGCTGGTGGATTTCTCCTATTCGATCATCGTCACCGGGCAGAAGGCCCTGGTGAAGAAGAACGCCGGCTTCGCCT CGCTGCATGACCTCGACGGCAAGAAGGTGCTGACGGTCAAGGGCGGCACCCAGGAGCCGAACATCCGCAAGGCGTTGCCCAACGCCCAGGTGGTCACCTT CGAGACCAGCCAGCAGGCGCTGCTGGCGTTGCAGCAGGGCAAGGGTCAGGCCTTCGTCGACGACGAGTCGGCACTGGTCAACGATTTCGGCAAGCTCGGC GCGGCGGCCGGCGGCTACGCCATCCTGCCGGAGAACCTGAGTACCGAGGCCCTGGCCATCGCCTTCCGCAAGGGCAATCCGCAACTCAAGCAACTGGTCG ACTCGACCCTCGCCGGCCTGGAGCGCAGCGGCGCGGCGGAGCAGCTGTACCTCAAGTGGTACGGGCCGGGCACCAAGTCCAACCTCAGCGAGCGCCACTT CAAGATCGATTCCGACCGGATCCCCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCTGACGTCTCTGCGTGACGGCGACCATGCGCGTCGCCGCCCGTCCCCTGTGAGTCCTCGCGGACAGCGTGCGCCTTTCCCATGTTCGAGTTCGATT TCTCCCTGCTGCTGCGCGGCCAGTACCATGAGATGCTGGTCGCCGGCCTGCTGCTGTCGCTGAAGCTGGCCGCCGTCACCCTGGTCTTCGCCGTGCCGCT GGCGATGCTGGTGGCGCTGCTGCGCCTGGCGCCGTTCCGCGCCCTGCAATGGCTCGGTTTCGCCTATGTCGAGAGCATCCGCAACGTACCGCTGCTGGCG CACATGCTGTTCTGGTACTTCGCCGCGCCGGAATGGCTACCCGAGGACCTCAAGGCCTGGCTCTACGCCGGCAACATCGAGGCCGCCAGCGCTATCGTCG CGCTGACCCTGTACACCGCCGCGTTCATGAGTGAGGACATGCGCAGCGGCATCCGCGCGGTGCCCACGGTGCAACTGGAGGCCGCCCGCGCGCTGGGCTT
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| Amino Acid Sequence |
>putative amino acid ABC transporter substrate-binding protein
MKIRLLGAALAAVFTLIGSAAHADDLADIRKKGEIVIGTLGTDEPNSFIDPKTRQIIGYEVDLGTEIAKAIGVKPVFKQISVAARIPELQQGHVDLLAAS LTHNKEREALVDFSYSIIVTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALPNAQVVTFETSQQALLALQQGKGQAFVDDESALVNDFGKLG AAAGGYAILPENLSTEALAIAFRKGNPQLKQLVDSTLAGLERSGAAEQLYLKWYGPGTKSNLSERHFKIDSDRIPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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