Strain | Pseudomonas aeruginosa BWHPSA026 genomic scaffold adgfP-supercont1.6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TATACATCGCGATGGTGCACATCATGCTGCCGTTCATGATCCTGCCGATCTACAGCGTGATGAAGGGCATTTCGCCGAGCTACATGCGCGCCGCGATTTC CCTCGGCTGCCACCCGTTCGCCAGCTTCTGGCGGGTGTATTTCCCACAGACCGTCGCGGGCGTCGGCGCCGGTTGCCTGCTGGTGTTCATCCTGTCCATC GGCTACTACATCACCCCGGCGCTGCTGGGCAGCCCGAACGACCAGATGGTCAGCTACTTCGTCGCCTTCTATACCAACAGCACCATCAACTGGGGCATGG CCACCGCCCTCGGCGGCCTGCTCCTGCTCGCTACCCTGGTGCTCTACGTCGTCTACAGCTGGCTGGTGGGCGCCAGCCGCCTGCGCCTGGGATAGAGCGC CTTCCGAGAAGGCCAACCGATTCCCCTCTCCCTTCGGAAAAAAGGCTGCCCGGAGGGCGGGGAGAGGGGGATCCGCACGAAACACATTGGAGAGCGAGTC
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DNA Sequence for Gene |
>Q039_06132
ATGCTGAGTCCCTACATGTCCCCGGTCGAGCGCCTGTGGTTCTACTCCCTGCGCATCCTCTGCGGCCTGGTACTGCTGTTCCTGGTACTGCCGGTGCTGG TCATCGTGCCGCTGTCGTTCAACTCCGGCACCTTCCTGGTCTACCCGCTGCAAGGGTTCTCCCTGCGCTGGTACGCCGACTTCTTCCAGTCCGCCGAGTG GATGCGCTCGTTGACCAACAGCATGATCGTCGCTCCGGCGGCGACCCTGCTGGCGATGGTCTTCGGCACTCTGGCGGCGATCGGCCTGACCCGCGGCGAG TTCCGCGGCAAGGCACTGGTGATGAGCCTGATGATTTCGCCGATGGTGGTGCCGGTGGTGATCATCGGCGTGGCCAGCTACCTGTTCTTCGCTCCGCTCG GGCTCGGCAACAGCTACCTGTCGCTGATCGTGGTGCATGCGGTGCTCGGCGTGCCGTTCGTGATCATCACCGTCTCCGCGACCCTGCAGGGGTTCAACTA CAACCTGGTGCGCGCCGCCGCCAGCCTCGGCGCGCCGCCGCTGACCACCTTCTTCCGGGTGACCCTGCCGCTGATCGCTCCCGGGGTGATCTCCGGCGCG CTGTTCGCCTTCGCCACCTCGTTCGACGAAGTGGTAGTGACCCTCTTCCTCGCCGGCCCCGAGCAGGCCACCCTGCCGCGGCAGATGTTCAGCGGCATTC GCGAGAACCTGAGCCCCACCATTGCCGCCGCGGCGACCTTGCTGATCGGTTTCTCCGTACTGCTGTTGCTGACCCTGGAATGGCTGCGCGGGCGCAGCGA GAAGATGCGTACCGCACAACCCGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCAGGGCGCGCCCGGCTTGGTCCGGGCGTCGGCTGCTGCGGCGAAAAGTCGTCATTTTCACCGCCAAAAACCGATAACGGCTACAATGCGCGCCTTC CGTGATCCCCTTTGAGGTGCGCCATGCAACCCTTCGCCATCGCTCCGTCGATCCTTTCCGCCGATTTCGCCCGCCTGGGCGAGGACGTGGACAAGGTGCT CGCCGCCGGTGCCGACATCGTTCACTTCGACGTGATGGACAACCACTACGTGCCGAACCTGACCATCGGCCCGATGGTCTGCTCGGCGCTGCGCAAGTAC GGCGTGAGCGCGCCGATCGACGTGCACCTGATGGTGTCCCCGGTGGATCGCATCATCGGCGACTTCATTGAAGCTGGCGCCACCTACATCACCTTCCATC CGGAAGCTTCCCAGCACATCGACCGTTCCCTGCAACTGATCCGCGACGGCGGGTGCAAGGCAGGCCTGGTGTTCAACCCGGCCACTCCGCTGGAGGTGCT
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Amino Acid Sequence |
>polyamine ABC transporter permease
MLSPYMSPVERLWFYSLRILCGLVLLFLVLPVLVIVPLSFNSGTFLVYPLQGFSLRWYADFFQSAEWMRSLTNSMIVAPAATLLAMVFGTLAAIGLTRGE FRGKALVMSLMISPMVVPVVIIGVASYLFFAPLGLGNSYLSLIVVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGAPPLTTFFRVTLPLIAPGVISGA LFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIGFSVLLLLTLEWLRGRSEKMRTAQPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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