Pseudomonas aeruginosa PAO1, PA3865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGATTGCAAGCCGCTACACATAGCTGCGCCGCGCGTCCGGGTGGCCGGGCATGTCCAGCCCGGCCTAGTCCCGTACGTCGCTCAGGCACCCTTCGGTACT CGCGCTCGGCGCCGACCTGGACGCGCTAGCTGGCGGAGCGCGGCTTGCGACGGGTAGCGAAGCCTTTCAAGGGCGTTGACGAAACGAAAAAATCCCCGCG GCATGAGCGTGACGCGGGGATCCAGGCGTAAATAGAGCCTTAACCGTGATAGCTGAAATGGAGCAAGGGGTGATGTCTGCGTAGCGGAACACCTCGCGGG GTGGCTGTGTATGGCTCAAGACTAAGTCCCGCGGGCCGGCGGGCCTATTCCTCGAAGGAGGTAAGGAGGGGTAGCGGAGGAGGGACGGCGATTGACGGTG TGTACTTTTTGGTCCAGATTGGACGAAAAGTATAAGGACAGATCACCGTCTGTTTCCCGCCCGGGCCGCGGGCGCACCTTCGTCACCCCTGGAGTCGTCC
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| DNA Sequence for Gene |
>PA3865
ATGATCAAGTCGCTGAACACCAAGAACCTGCTGGGAGGCCTGCTGCTCGGCGTGCTCGCCAGCGGATCCGCCGTCGCCGCCGATGGCAACCTGCGGATCG GCATCGAGGCCGCCTACCCGCCGTTTTCCTTCAAGACCGCCGAAGGCGAACTGGCCGGCTTCGACTACGACATCGGCAACGCGCTGTGCGCGCAGATGCA GGTGAAGTGCCAGTGGATCGAGCAGGAGTACGATGGCCTGATTCCCTCGCTGAAAGTTCGCAAGATAGACGCCGCGCTGTCCTCCATCACCATCACCGAG GAACGCCGGCGCTCGGTGGACTTCACCCACAAGTACTACTTCACGCCGGGCCGCCTGGTGATGAAGGAAGGCGCCCAGCTCGACGACAGCTTCAGCCAGT TGGCCGGCAAGCGCATCGGCGTGCAGCGCGGCGCTACCGCCGACCGCTTCGCCAGTGCGGTGCTGGCCAAGGCCGGTGCCGAAGTGGTGCGCTACACCAG CCAGGACGAGATCTACCTGGACCTGGTGGCCGGCCGCCTCGACGCCACCTTCGCCGACTCCATCCCGCTGCAGACCGGCTTCCTCGATACCCCGCGCGGC AAGGGCTACGCCTTCGCCGGGCCGGAGTTCAAGGACCCGAAATACTTCGGCGAGGGCGCCGGGATCGCGGTGCGCAAGGGGGACGCCGAGCTGGTCGGCA AGCTCAACGCGGCGATCGACGCGATTCGTGCCGACGGGACCTACAAGCGCATCGAGGGCAAGTACTTCAAGAGCGACATCTACGGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCTCGCCGGCGGCGGTTGCCGTCAGTCGCCGCCTTCCTTCAGCTCCTTGAGGTGCTTGTAGACCGTCGCCCGGCCCATGTTCAGCACGTTGGCCACAT AGTTGGCCGCGCTCTTGCCCTTGAACGCGCCCTCGGCGTGCAGGGCCAGGACCAGTTCGCGCTTGTGCTCGCGGGTCAGCAGGTTCAAGCCGAGCTGGCG CTGCCGCAGCCAGCCGTGCAGGAAGGTGTTGATGCGCTCCTGCCAGTCGTCGCGGAACAGCGCGTCCGGTTGCGGAATCAGCTTGCTCGGCGAGAGGAAC AGGTCGAGTGCCGCCTTGGCGCTCTCGAACAGGCTGATGTTCAGGTTGATGCACAGCACCGCCAGCGGCTGGCCGGCGGAGTCGCGCAGCACGGTGCTGA CCGAGCGGATCTTCTGCCCGTCCCAGTTGAGCTTCTCGTAGGGACCGATGTTGCGCTCGTCGCTATCGCCTTCGAGCATGTCTTCCAGCGCCGAGTCGTC
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| Amino Acid Sequence |
>putative periplasmic lysine-, arginine-, ornithine-binding protein
MIKSLNTKNLLGGLLLGVLASGSAVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQMQVKCQWIEQEYDGLIPSLKVRKIDAALSSITITE ERRRSVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKRIGVQRGATADRFASAVLAKAGAEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLDTPRG KGYAFAGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAIRADGTYKRIEGKYFKSDIYGD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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