Pseudomonas aeruginosa PAO1, PA3263 (rdgC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006310 | DNA recombination |
Inferred from Sequence Model
Term mapped from: InterPro:PF04381
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003677 | DNA binding | Inferred from Direct Assay | ECO:0000096 electrophoretic mobility shift assay evidence |
17426134 | Reviewed by curator |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Hamap | MF_00194 | Recombination-associated protein RdgC [rdgC]. | IPR007476 | Putative exonuclease, RdgC | 1 | 302 | 45.013474 |
| PANTHER | PTHR38103 | RECOMBINATION-ASSOCIATED PROTEIN RDGC | IPR007476 | Putative exonuclease, RdgC | 1 | 304 | 0.0 |
| Pfam | PF04381 | Putative exonuclease, RdgC | IPR007476 | Putative exonuclease, RdgC | 1 | 300 | 1.7E-115 |
| Coils | Coil | Coil | - | - | 90 | 110 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.