Strain | Pseudomonas aeruginosa BL13 genomic scaffold adgfQ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGGTGTTCCTCTGCCTGGCGGCCCTGTACGAAAGCTGGTCGATTCCGTTCTCGGTGATGCTGGTGGTGCCGTTGGGCGTGATCGGCGCGCTGCTGGCG ACGTCCATGCGCGGCCTGTCCAACGACGTGTTCTTCCAGGTGGGCCTGTTGACGACCATCGGCCTGTCGGCGAAGAACGCCATCCTCATCGTGGAGTTCG CCAAGGAGCTGCACGAGCAGGGCAAGGGCATCGTCGAGGCGGCCATCGAGGCCTGCCGCATGCGTCTGCGGCCGATCGTGATGACCTCCCTGGCGTTCAT CCTCGGCGTGGTTCCGCTGGCGATCTCCACCGGCGCCGGCTCGGGCAGCCAGCATGCGATCGGTACCGGCGTGATCGGCGGCATGGTCACTGCGACCGTC CTGGCGATCTTCTGGGTACCGCTGTTCTACGTGGCGGTCAGCACGCTGTTCAAGGACGAGGCGTCCAAGCAGCAGGCTGAGGCCGAAAAGGGGCAATGAT
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DNA Sequence for Gene |
>Q067_00465
ATGAAAAGGTCCTTCCTTTCCCTGGCGGTAGCCGCTGTCGTTCTGTCCGGCTGCTCGCTGATTCCCGACTACCAGCGCCCCGAGGCGCCGGTAGCCGCGG CCTACCCGCAAGGGCAGGCCTACGGGCAGAACACCGGCGCGGCGGCCGTTCCGGCCGCCGACATCGGCTGGCGCGAGTTCTTCCGCGACCCGCAGTTGCA GCAACTGATCGGCGTGGCGCTGGAAAACAACCGCGACCTGCGGGTCGCCGCGTTGAACGTCGAGGCCTTCCGGGCGCAGTACCGCATCCAGCGGGCCGAC CTGTTCCCGCGGATCGGCGTGGACGGTAGCGGCACCCGCCAGCGTTTGCCGGGCGACCTGTCGACCACCGGCAGTCCGGCGATTTCCAGCCAGTACGGGG TGACCCTGGGCACTACCGCCTGGGAACTCGATCTCTTCGGCCGCCTGCGCAGCCTGCGCGACCAGGCCCTAGAGCAGTACCTGGCGACCGAACAGGCGCA GCGCAGCGCGCAGACCACCCTGGTGGCCAGCGTGGCGACCGCCTACCTGACGCTGAAGGCCGACCAGGCGCAGTTGCAACTGACCAAGGACACCCTGGGC ACCTACCAGAAGAGTTTCGACCTGACCCAGCGCAGCTACGACGTCGGCGTCGCCTCCGCGCTCGACCTGCGCCAGGCGCAGACCGCCGTGGAAGGCGCCC GCGCGACCCTGGCGCAGTACACCCGCCTGGTAGCCCAGGACCAGAATGCACTGGTCCTGCTGCTGGGTTCCGGGATCCCGGCGAACCTGCCGCAAGGCCT GGGCCTGGACCAGACCCTGCTGACCGAAGTGCCGGCGGGCCTGCCGTCGGACCTGCTGCAACGGCGCCCGGACATCCTCGAGGCCGAGCACCAGCTCATG GCCGCCAACGCCAGCATCGGCGCCGCGCGCGCGGCGTTCTTCCCGAGCATCAGCCTGACCGCCAACGCCGGCACCATGAGCCGCCAACTGTCCGGCCTGT TCGACGCCGGTTCGGGTTCCTGGTTGTTCCAGCCGTCGATCAACCTGCCGATCTTCACCGCCGGCAGCCTGCGTGCCAGCCTGGACTACGCGAAGATCCA GAAGGACATCAACGTCGCGCAGTACGAGAAGGCGATCCAGACCGCCTTCCAGGAAGTCGCCGACGGCCTGGCCGCGCGCGGTACCTTCACCGAGCAGTTG CAGGCACAGCGCGATCTGGTCAAGGCCAGCGACGAGTACTACCAGCTCGCCGACAAGCGCTACCGCACGGGGGTGGACAACTACCTGACCCTGCTCGACG CGCAACGCTCGCTGTTCACCGCGCAGCAGCAACTGATCACCGACCGCCTCAACCAGCTGACCAGCGAGGTCAACCTGTACAAGGCCCTCGGCGGCGGCTG GAACCAGCAGACCGTGACCCAGCAGCAGACCGCGAAGAAGGAAGATCCGCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCCTTCCGCGCCATGCAAGAACGCCGACCCTAGGGTCGGCGTTTTTTTATCCTCGCGGAAGTCGGCGGGTCCGCGTCACGGACCCGCTCGGCCTTAGC GGTTGCGGGTCAGCAGTGCGGGGCGCTCGCCCTTGCGCCGCGGCTCCAGCTCGTCGAGCTGCTCGGCGGTGGGGAAGCGATCCATGCGCACCAGGTCGCG CTTGTTGATCACCACCGGCTGGCGGCTCGGCTGCTTGCCGGTGCCGTACTCGGACGGCTCGCGCAGCGGCGCGTCGCTCATCCGCGAGGCATTCTCGCGA CCCTGGCCGCGCGGCTTGCTGGCGCGCGGTTTCTTCGCCTTGCCCTGGCCGGCACCCTGACCGCGAGCGCCACCTTGAGCGGCGCCCTGGCTCTTGCCGC GAGCTTGGCCCTGGCCTTGGCCACGACCCTGCTGGCCGGTGCCGCCCTGGGGTTTCTGCTGGCCACCGCGGCGTCCGCGTCCCTTGTTTTCCTGACCCTG
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Amino Acid Sequence |
>multidrug transporter
MKRSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFRDPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRAD LFPRIGVDGSGTRQRLPGDLSTTGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAYLTLKADQAQLQLTKDTLG TYQKSFDLTQRSYDVGVASALDLRQAQTAVEGARATLAQYTRLVAQDQNALVLLLGSGIPANLPQGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQLM AANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARGTFTEQL QAQRDLVKASDEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWNQQTVTQQQTAKKEDPQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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