Strain | Pseudomonas aeruginosa BL19 genomic scaffold adgeJ-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGATGTCGTGAAACGGTACTGGATGGTTTCAATGGATTTCTGGTACCGATCAAGAGTCCGCAGAGTTTAGCCGCGGCAATGTTGAAGTTCATCGAGTCG CCTTCGCTCATCGCACGTATGGGAGAAGCCAGTAGATCGCTGGCGGAACAGCGCTATGACGTTTTCAGGATAAACAATACGATGCTTTCTGCGTTGTAGG GATCTGGCTGTGAGTTGTATGAAGGGTAATGCGCCGGTACTTGCGGCCGTAGATATAAGCAAGGGTTTTAGAGTCTACAGGGCTCTTCATCAAAGGATGT TGCAGGCCCTCTGGGGTGAGAGAAAGAAATTTTATTCGGAATTCTGGGCTCTGCGGAATGTGAGTTTCCAGGTTTTTCCTGGGGAGGTTGTTGGAGTAAT CGGCTGCAACGGCTCCGGGAAGTCCACCTTGCTGCAGATACTTGCGGGTACCTTGCGCCCTACGAGTGGACAGGTGGTTCGCCCAGAAAGGGTAGCGGCA
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DNA Sequence for Gene |
>Q073_03090
TTGTTGGAGCTGGGGGCCGGTTTCAACATGGAGTACACCGGCAGGGAAAACATAATCTTCAATGCCATGCTTCTTGGACTGGGCGAGCAGGAGATTTCTG AACGCCTCGACGAGATAATCCAGTTTGCCGATATCGGTGAGTTCATCGATCGTCCGGTTAGAACATATTCGAGCGGTATGTTCGTGCGTTTGGCTTTCTC CATTGCGGCATATGTCGATGCCGATGTGCTGATCGTGGACGAGGCCCTGGCGGTAGGTGACGCCGCGTTTCAGTTCAAATGCCTGAACCGGCTTGAAGAA CTGCTGCTGAAAGGCATCACCATCCTGCTGGTCTCCCACGATATACAGTTGATCAAGAGTTATTGTAGTCGAGCGATCTATCTATCCAAAGGTAGAGTGA TATTCGATGGCGACTGTGAAACAGCCACGGAACTCTATCTGCGGGACAGTATAGAGACACAGCGGGCGGAAGTCCGCTCAGGAAGCCTGATCGCTTCTGG CGAACACGGGAACTCGGTAATTGCATATGGAAATGGGCAGGGCAGGTTTCTATCCATCCGTATGGGTGTACTTGACGAAGCCCGGGATTACTTCGATTCG GGCGAACGTGTCTGGGTCGAGGTACTTGTGCAATTTGACCTACCCGTCCCGGAGCACCCAAAAATCACCCTGACTATCCGTGACCAGCGCGGTTACAACC TCTATGGCATAAACAATTTATTGCTGGGCAAGGCTCTGAATGTCGAGCCTGACGGGCGCTTGAGAACACGTATCAGCTTCGACTGCGACTTGCAGGCCGG CGAATACGCCTTGACGTTTCGTCTGGAGAACTCTTTGTCGGAGTCCGTTTGCGAACTCATGGATAAAAAGGTCAATGCGGCGATATTCAGGGTCTTCAAT TCGCCCAAGTGCTTCGATGCAGTGGTGAATCTGCATGGAGCATTCGAGCCGGTTCCGTTCTGCTGCGAGACCCGGGCTACCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGTCATCGTCTTTGACCATGGTATTCGTCGTCCACGCCGGCGAGCTGGAAATCAAGTCTGCCGTGTTGGCGGCTTCTCTACGCAAACGCTTTGGCTTTTC CATGGATATCATTGCCGCATGTCCATCGGGAAAGGCTGACTGGGGTGTGCCAAGCGATGCATCCCGGCGCTTATATGAGCGTTTGGGCATTCCTCTTTTG CCTATGGATAGTCCTTTCGGGCCAGAGTATCCAATAGGCAACAAGTTCGCGGCGTTGGCGCTGGGGCCGGCTGTTGGGCATACGTTGTTTCTCGACAGTG ACATGATCTGTGTCGATGCATTCGAAGCTGACATGCTTTGTCGTTTCGATGCGGCACTCAAACCTGCCGATATGGCATTGGTGGCAAAACAGAACGATTA CTGGGAACGCATATACGCCCATGCGGGATCGGCATTGCCTGGAGATCGGGTAGTGACCACTTGTTCCGGGGAAGCGATGCCTGCGTACTATAACGCTGGC
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Amino Acid Sequence |
>ABC transporter ATP-binding protein
MLELGAGFNMEYTGRENIIFNAMLLGLGEQEISERLDEIIQFADIGEFIDRPVRTYSSGMFVRLAFSIAAYVDADVLIVDEALAVGDAAFQFKCLNRLEE LLLKGITILLVSHDIQLIKSYCSRAIYLSKGRVIFDGDCETATELYLRDSIETQRAEVRSGSLIASGEHGNSVIAYGNGQGRFLSIRMGVLDEARDYFDS GERVWVEVLVQFDLPVPEHPKITLTIRDQRGYNLYGINNLLLGKALNVEPDGRLRTRISFDCDLQAGEYALTFRLENSLSESVCELMDKKVNAAIFRVFN SPKCFDAVVNLHGAFEPVPFCCETRATQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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