Pseudomonas aeruginosa PAO1, PA1946 (rbsB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACGCCTGGCCGGGCAATGTCCGCGAACTGGCCAACCGGGTGCGTCGCGGGTTGGTCCTGGCGGAGGGGCGGCAGATCGAGGCCCAGGACCTCGGCCTGG AGTGCGCGCGCGGCGACGGCCCGCCGTTGTCCAGCCTGGAGGTCTACAAGCTCTGCGCCGAGCGCCAGGCGATGTGCGACGCGCTGGCCCGTTACGGCGA CAACCTCAGCGTGGCCGCGCGGATGCTCGGGGTGTCGCGGCCGACCTTCTACCGCCTGTTGCACAAGCACCGGTTGCGCTGAGTGGGCGGCGGGAGATCT GCCAGCCAGGCAAAATATCCTGCGTTTCCCAGCCGTAGCGAACTAGAATCCAACCGATCCCGACCGGTTCGCGACAGTTGCTCGTGGCGATTGACAGAAT CTGTCAGATCGACGCATATTCACCTAACGCAAACGTTTGCGTCTGGATAATCTCCTGGAAAAGCCTCAATACAACGATAAGAAAAGCTGGAGGATACACC
|
|
| DNA Sequence for Gene |
>PA1946
|rbsB
ATGAAGCGGGTCGCTTCCCGGCGCCTGTTGGCTGCCGTTGTGCTGACTGCCTGTTCCTCGTTCCTGCCCCTGTCCGCCGTCCACGCGGAAACTCCCGAGA AGCCCAGGATCGCGCTGGTGATGAAGTCGCTGGCGAACGAGTTCTTCCTGACCATGGAGGACGGCGCCAAGGCCTACCAGAAGGAGCATGCCGACCGGTT CGAACTGGTTTCCAACGGCATCAAGGACGAGACCGATACCTCCAGCCAGATCCGCATCGTCGAGCAGATGATCGTTTCCGGGGTCGACGCACTGGTGATC GCGCCGGCCGATTCCAAGGCGCTGGTGCCGGTGGTGAAGAAAGCGCTGGACGCCGGCATCGTGGTGGTCAACATCGACAACCGCTTCGACCCGCAGGTGC TGCAGGCGAAGAAGATCGGCGTGCCCTTCGTCGGGCCCGACAACCGCAAGGGTGCGCGGCTGGTCGGCGAGTACCTGGCGAAGCGACTGAAGGTCGGCGA CGAGGTCGGCATCATCGAAGGGGTCTCCACGACCACCAATGCCCAGCAGCGCACCGCCGGTTTCAAGGATGCGATGGACGCGGCGGGGATGAAGATCGTC TCCTTGCAGTCGGGCAACTGGGAAATCGAGAAGGGCAACGCGGTGGCCTCGGCGATGCTCAACGAGCATCCTGACCTCAAGGCGCTGCTCGCCGGCAACG ACAGCATGGCCCTCGGCGCGGTATCGGCGGTGCGCGCGGCGGGCCGCGCCGGGCAGGTGAAGGTGGTCGGCTACGACAATATCCAGGCGATCAAGCCGAT GCTCAAGGATGGCCGGGTGCTGGCCACTGCCGACCAGTTCGCCGCGAAGCAGGCGGTGTTCGGTATCCAGACCGCGCTCAAGCTGCTCGCCGGGCAAACC CCGGAACATGAGAAGGACGGCGTGGTCGAGACGCCTGTCGAGTTGGTGACCGCGCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGTCCGATGGAGCCTTCCCATGTCTAGCGACGCATTGCCGCTGCTGAGCATCCGCGGGGTCGGCAAGACCTACGCGCAGCCGGTGCTGGCGGAGATCG ACCTGCAACTGTTCGGCGGCGAGGTGCTGGCCCTGACCGGCGAGAACGGCGCCGGCAAGAGCACCCTGTCGAAGATCGTCGGCGGCCTGGAGCGTCCCGG CGCCGGCAGCCTGGAACTCCTCGGCCGGCCCTACGCCCCCGCTAGCCGCCGCGAGGCCGAGGCGCTGGGCGTGCGCATGGTGATGCAGGAACTGAACCTG CTGCCGACCCTGTCGGTGGCGGAGAACCTGTTCCTCCACGACCTGCCCCGGCGCGCCGGCTGGATCGACCGTCGGCGCCTGCGCGCGGCGGCCCGCGAGG CGATGGCCCAGGTCGGCCTGGAGGCGATCGATCCCGACACGCTGGTCGGCGACCTCGGCATCGGCCACCAGCAGATGGTCGAGATCGCCCGCAACCTGAT
|
|
| Amino Acid Sequence |
>binding protein component precursor of ABC ribose transporter
MKRVASRRLLAAVVLTACSSFLPLSAVHAETPEKPRIALVMKSLANEFFLTMEDGAKAYQKEHADRFELVSNGIKDETDTSSQIRIVEQMIVSGVDALVI APADSKALVPVVKKALDAGIVVVNIDNRFDPQVLQAKKIGVPFVGPDNRKGARLVGEYLAKRLKVGDEVGIIEGVSTTTNAQQRTAGFKDAMDAAGMKIV SLQSGNWEIEKGNAVASAMLNEHPDLKALLAGNDSMALGAVSAVRAAGRAGQVKVVGYDNIQAIKPMLKDGRVLATADQFAAKQAVFGIQTALKLLAGQT PEHEKDGVVETPVELVTAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|