Pseudomonas aeruginosa BL21, Q075_03005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BL21 genomic scaffold adgep-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCCTGGCGCTGGCGATCCTGGCGCTGGCCGGCTGCTCGTATTTCTTCGCGCCGCGGGTCGAGTTGCAGCGGCTGACCCTGGATGTCGCCGCGCGCGCCA ACGACGACTCGCCGATCGCCGTGGACTTCGTCGCGGTGAAGGATGCGGAGCTGTTCAAGGAACTGGCCGGACTGCCGGCCAGCCAGTGGTTCGCCAATCG CGAGCAGTACCGCCGCGACTACCGGCAGCAGTTCGCGGTATGGAGCCTGGAGCTGGTCCCGGGGCAGTTCATCGAGTCGGAGTCGTTCCCCTTGCGCGGC GACCGCGCAACTGGACTTTTGGTCTTCGCCGGCTATAACACACCCGGCGCGCACCGCTTGCGCCTCGACCAGCAGCAGCGCGTCTGGCTGCGTCTGGATA CCCGGGAAATGCGACTGGTCAACGATCCCGCCACGCGTTAGCGGAGGGGCAGGCGAGCGACCGTCGTGCACGACAACGTAGGACGTCGAAGGGGAGTCGT
DNA Sequence for Gene
>Q075_03005
ATGAGTGTTCTGCCTGACGCGGTGTGCTGGCACGAAGGGATGCAACTGCTTCCCCAGCATTTCCAGTTGCAGGGATTGCGTGCCGAGGCGCTGGCGGCGC GCACCGGACAGGCCTGCAACCCTTGGTTCTGGGGCGTGACCGCCCTGGAACTGGACCCCTCGGCGTTGTGCGCCGGCCAAGTGCGGGTCCTGCACCTCGA AGCGATCCTGCCCGACGGCCTGCCGGTGAGCGTGCAGGCTGGTGTCGACGCGCCGCTGGAGTTCGACCTGGAGACTGCGCTGGCGGCCGCCGAAGGGCCG CTGCTGAACGTCCACCTGGCGGTCAGTCCGCTGTGGCGGGCGGGTCAGTTGCTGCCGCTGAAGGGCCGTCTGCAATCGCGGGTCGGCGCGCCGCTGCCAG ACCTGGCCAGCGGCGAGCACCCCGAGCCGATCACCGTCTGGCGAGCGTCGCTGCGGCTGGTCGGCGACGACGGCAAGGCCGACTCCGTGTGCCTGCCGTT GCTGCGCGTGGCGAAGGAGGGCGGCGCCTATGTCAGCCTGCCCTACGTCCCGCCGACGCCATTGGTGCTGCCGGAGTCGCCCCTGGGCAGGCGCGTGCAG TCGCTCTGCGCGCGGGCCCGGGAGAAGGCGCTGTTCCTCGGCGGGCGCCTGCGCCTGGCGCAGCAGGCGGGCAACCAGGACGACGCCGTGGAAGTCCGTC GCCAGCTCGCCGCGCTCTGGACCCGCCTGCCGGAGGTGGAAGGCCTGCTGGCAAGCCGCGCGGCCTCGCCGCTGGCCCTGCACGGCAGCCTGCTGGGCCT GGCCGGGGCCTGGGCGGCGCTCGATCCGCTGGCCGGCGTGCCGGCCTTCGAAGCGCTCGACTTCCTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGAC TGGCTGGAGCGCGCCATCGAGTCGATCCGCGCGGGCTACCGCTGCCTGCCGTTCGAGCAGGAGGAACAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGC CGCGCCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCGGCGCCGGCGAACAAGCGGCGGCTGACTGGCTGGAGCGCGCCATCGTCGCCTCCGACCCGCA CCTGCCGTTGCTCGCCCGGCAACGCATGAGCGGGCTGGCGCGGCAGCCGATGAATCGCCAGGAACAGGTGGCCTACAGCGTCGGCGACGACACCCGTTTG TTCGTCGTGCAGGGCGCCGGCGACTGGTTCGATGCCGGCCAGCCGCTGCGCATCGTCGCGCCGGTCAGCGGGGTCGCCAGCAGTCCCTGGCAGATCGTGC TGTTCGTCGCCGACGGCAGCGACAACACCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGGAAGGAGCCGCCAATGCCCGAAGGGAGTGCAGGGCCTTTTTCCCAGGCGTACCAGGAGCAGCCGCTCAGCACGGCATTCCGCCAGGCCTGGCAGGA ATGGCTGGAGGCCTGGGGCGCCCTCGACCGCGACGCCCAGGATGTGCCACGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGCATCACCCGGCGTCTG TGGCGCAGCGCCTTCGCCAGCGTCGGCGACGCGGCGGGCGTGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACCCTGGTCTTCA GCGCCTGGCCGGGGCAGGGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCG CCTGCTCGACGAACGCGCCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCCTGCGCGGGCCGCGCGGC
Amino Acid Sequence
>type VI secretion protein
MSVLPDAVCWHEGMQLLPQHFQLQGLRAEALAARTGQACNPWFWGVTALELDPSALCAGQVRVLHLEAILPDGLPVSVQAGVDAPLEFDLETALAAAEGP LLNVHLAVSPLWRAGQLLPLKGRLQSRVGAPLPDLASGEHPEPITVWRASLRLVGDDGKADSVCLPLLRVAKEGGAYVSLPYVPPTPLVLPESPLGRRVQ SLCARAREKALFLGGRLRLAQQAGNQDDAVEVRRQLAALWTRLPEVEGLLASRAASPLALHGSLLGLAGAWAALDPLAGVPAFEALDFLDLRRGYEPLLD WLERAIESIRAGYRCLPFEQEEQVFSVRLPDPAPRQRLVVGLRMPAGAGEQAAADWLERAIVASDPHLPLLARQRMSGLARQPMNRQEQVAYSVGDDTRL FVVQGAGDWFDAGQPLRIVAPVSGVASSPWQIVLFVADGSDNT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site