Pseudomonas aeruginosa BL25, Q079_03059
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL25 genomic scaffold adgfY-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGATGAACGTCGCCAAGCAGGTCACCAACGGTGCCGTGCCGATGGGCGCGGTGATCGCCAGCAGCGAGATCTACGACACCTTCATGAACCAGGCGCTGC CCGAGCACGCGGTGGAGTTCAGCCACGGCTACACCTACTCCGCGCACCCGGTTGCCTGCGCCGCCGGCCTCGCCGCGCTGGACATCCTGGCCAGGGACAA CCTGGTGCAGCAGTCCGCCGAGCTGGCGCCGCACTTCGAGAAGGTCCTGCACGGCCTGCAAGGCGCGAAGAACGTCATCGACATCCGCAACTGCGGCCTG GCCGGCGCGATCCAGATCGCCCCGCGCGACGGCGATCCGACCGTGCGTCCGTTCGAGGCCGGCATGAAGCTCTGGCAACAGGGTTTCTACGTGCGCTTCG GCGGCGATACCCTGCAATTCGGCCCGACCTTCAACGCCAGGCCGGAAGAGCTGGACCGCCTGTTCGACGCGGTCGGCGAAGCGCTCAACGGCATCGCCTG
|
|
| DNA Sequence for Gene |
>Q079_03059
ATGAGCGGCCGCCCGCAAGCCGTACCCACCGTGCAGGTGGACAACGCCGAGGTGATCGTGACCGAATGGCGCTTCGCCCCCGGCGCGGAAACCGGGCGCC ACCGCCACGGCCACGACTATGTGGTGGTACCGCTGACCGACGGCACGCTGCTGCTGGAAACCCCCGAGGGCGACCGCCACGCGCCGCTGGTCGCCGGACA GGCCTACTTCCGCAAGGCCGGCGTCGAGCACAACGTGATCAACGCCAGCGCACACGAAGTGGTCTTCGTCGAGACCGAGATCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCGCACCCGCTCCCCAGGGAGCGGGTAAAGGGAAAGGGCCACGGCCCTTTCGTCACCCCTAGCGAAGAGAGAACAAGACAAGATGGGCACCCTCCACCA CCTGATCAACGGCGAAATGGTCGCCGACAACGGCCGCAGCGCCGACGTCTTCAACCCCTCCACCGGCGAAGCCATCCACAAGGTCCCGCTGGCCGACGGC AAGACCCTGCAGAAAGCCATCGATGCCGCCAGGGCCGCCTTCCCGGCCTGGCGCAACACCCCGCCGGCCAAGCGCGCACAGGTGCTGTACCGCTTCAAGC AACTGCTGGAGCAGAACGAGGCGCGGATTTCCAAGCTGATCAGCGAAGAGCACGGCAAGACCCTGGAAGACGCCGCCGGCGAACTCAAGCGCGGCATCGA GAACGTCGAGTACGCCTGCGCCGCCCCGGAAATCCTCAAGGGCGAGTACAGCCGCAACGTCGGCCCGAACATCGACGCCTGGAGCGACTTCCAGCCGATC
|
|
| Amino Acid Sequence |
>cupin
MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|