Pseudomonas aeruginosa PAO1, PA1232
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGCCGGGGCGGCGCTCGACCAGGCGCGGCTGGACCTGCGGCGCAGCGAGTTGCGCTCACCGGTGGACGGCTATGTGACGCAGTTGCGCGTGCAGCCCG GCGATTACGCGGCGGCGGGCCGGACCAACATCTTCATCGTCGATCGGCGAAGCTTCTGGGTCACCGGCTATTTCGAGGAAACCAAGCTGCGCAATGTACA GGTCGGCGCGCCGGCGACGATCAAGCTGATGGGGTTCGATCCGCTGCTCGACGGCCATGTCGCGAGCATCGGTCGCGGTGTCGCCGACCTCAACGAAAGC CGTGCCGACAGCGGCCTGCCGCAGGTCAGCCCGAACTTCAGCTGGATACGCCTGGCGCAGCGCGTGCCGGTGCGCATCGAACTCGACCGGGTACCGGCGG GCGTGGTGCTTGCCGCCGGCATGACCGGCAGTGTCGAGGTGCTGCAGGCGGGGACCGCGCGGCACTGGCGGCTGACCCGCTGGTTGCAGGAGTACCTTTG
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| DNA Sequence for Gene |
>PA1232
ATGGCGGCGTCTGCGTCCGGCGGGCGCGATTGGTACGCGGCGTTGCCGTTGCCCTGGCGGACCGACAGCCTGGGCTACGTGCTGCGCAGCATCGGCGCTG CCGCTCTGGCGCTCGGCCTGGGACTCTACCTGCAACTGGATTCGCCGTTTTCCGCGGCGTCCACTGTGCTGTTGCTGATCAATCCGGTGCAGGGGGCGGT GGTCGGCAAGGGCTGGTGGCGCGCCGTGGGTACCCTGGTCGGCACGCTCGCTGCCTTCGTCCTGACCGCGCTGTTCGCCCAGAAGATGCTGCTGTTCGTC GTCGCCCTGGGTTTCTGGCTGGGTCTCTGCGTCGGCGTCATGAGCCTGGTCCGGCACTTCTACGCCACCGCCGCGGTGGTCGCCGGCTACACCGTGTGCC TGGCGCTGGGACCGGCCATGGTCGAGCCCGAGGCGGCCTTCGAGCACATCGTCACCCGCGCCTCGGCGGTAATCGTCGGGGTCTGCTGCCTGAGCCTGGT GACCGTGCTCTTCAGCCGCAGGACCGTGTCCGGGCGGGTGCGCCAGCGTCTCGTCTCGCTCTGCGCGGCGACGCTGGCGCTGGTCGCTGCGCGGCACGCC GGTGCGGCTGACGGGGAACTGGAGCGCCGTCGCCGGACGCTGGCCGGCGAGGTCTACGCGGTAGACGACCTGCTGGGCGTCGGTCGCGCCGAGTCGCGGG TGCTGAGCGCTGCGCTCCCGGCGATCCGCGGTGGCCTGGCGGCGCTGTTTTCCACGCTGATGGAGTTCCGCTTCGCCGGCGAGACGCATTGGGCCCGGTG CTTGGCGGAGCGCGGACTGGCGCTGCCGATGGCCGACGACCTGCGCCTGCTGGGCGGCCAACTGGAGCGCGGCGAGCTCGACTTCGCCGGCGCCGCGCGA CGGCTCGCGAGCTTGCGCGGTCGCCTGGCGGCGATTCGGCGCGGACTTCCGACAGACCAAGCGGATGCCTGTCGCGAAGGGCTGTTCATGGAGCGTCTCG ACGAGCAACTGGATGACCTGCAGGCCGCCCTGCGGGGGTTCGCCCGGCTCGACGGCCGGGCCCCCGCCGACGTCCGCCCAGCGGCCTTCCATCGACATTA CCGCGAGGCCTTGCGCAACGGCGCGCGAGCCTGGCTGGCGATGCTGGTCGGCGGCGCCCTGTGGTTCCTCAGCGGGTGGGACCAGGGGCCGACCCTGCTG GCGGTGCTCGGCCCCTACTGCACGCTGCTGGCAGCCTCGCCCTTTCCCGCCGAGGGCACGCGCAATTTCATTCGCGGCACGCTCTACGCGATACCTGCCG CATTGCTCTGCAAATTCCTTCTGCTACCGCTGATCAACGGTTTTCCATTGCTGCTGCTGTGCCTCGCCTTCTTCTGGTCGTTCGGTATCCAGGCCACCAC AGTGCCCAGGCGGGCGTTGCAGGGAATCGCCTACCTGATCGCCTTCAACACCCTGGTCGCCACCGGCAATCTCGCCCGCTTCGATTTCGGCGACTTCGCC AACCAGTCCTGCGCCTGGGTGCTGGCGCTCTGCATCAGCCTGCTGGTCTACCGCCTGCTGCCGAAGGACCTGGAACGGCATTCGGCGTCGCTGCTCGACC ATCTGCGCCGCGAGACCCTCGCCTTGCTGCGTCGTCGCGCCGGTTTCGACGCGCATGCCTGGCAGGCCCGCCAGCAGCATCGCATCGCCCAGCTGGGCGC GCTGCATGGCATGGAACATCCGCGCAGCGCGCTGGCCCTGCGCCTGGGCTTCGTATCCCTGCAACTCGGCCGCGAGTCGCGGCGCCTGTGGCGCGCCCTG GCCGGGCTCGACCCGGCCGCCGCGGAGGCGCGGTGGATCGAGCGCGCACTGCGAGCCATCGCCGTCCGCCATCGCGATCCGCCGCTCGCCGCGCGGCACG CACGCCGTGCCGGCGCCCGCCTGGCGGCCGCCGGCGAGTGGCGCCTGGCCGCGATCCTCACCGACCTCGCCTGGTTGCTCCGGGCCTATTCGCAAAGCGT CTCGTCCGACGGGGCGCAGCATGGAGAAAAGACCTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAACCTCGTTCTTGCTGGCCTTGCTGCTGTCCTGCTGGTCCCAGGTCCAGGCGGCGGACGACGACGGGAAAGAGTTGCCGCCGATCGAGCGCTACGACTA CGGCATGCCGCTGGACATCGAGCGGGTGCTTTCCGTCACGCCGGTGCCGGCCACCTGTGGCGTGGTGCCGCTGGTGATGCTCTACCGCGACAGCGCCGGA CGCCTACATCGCTTGCAGTACCGAGGCCTTGGCGCGGGCTGTTCGCGGCACTGAGAAGCGGGCGCAGGCGCTGTCTCAGCGCGCCGCGCCTTCGATGATC GCCAGGACGTCGCCGATGGCGTGCTCCAGGTAGTCGCCCGCCTTGTACGCCGCAAGCGCCTGCGGACCGCCGTCGAGCACCGCCTGCGGCCGTTCGACGA AGCGTCCGAGCAGGTTGAACTCCTCGTCCAGCACCAGTACCAGCGGAATCGCGATTCGCTCCAGCGCCAGGCGCTGGCGCAGGTCGTCCTCGGCGCGGCC
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| Amino Acid Sequence |
>hypothetical protein
MAASASGGRDWYAALPLPWRTDSLGYVLRSIGAAALALGLGLYLQLDSPFSAASTVLLLINPVQGAVVGKGWWRAVGTLVGTLAAFVLTALFAQKMLLFV VALGFWLGLCVGVMSLVRHFYATAAVVAGYTVCLALGPAMVEPEAAFEHIVTRASAVIVGVCCLSLVTVLFSRRTVSGRVRQRLVSLCAATLALVAARHA GAADGELERRRRTLAGEVYAVDDLLGVGRAESRVLSAALPAIRGGLAALFSTLMEFRFAGETHWARCLAERGLALPMADDLRLLGGQLERGELDFAGAAR RLASLRGRLAAIRRGLPTDQADACREGLFMERLDEQLDDLQAALRGFARLDGRAPADVRPAAFHRHYREALRNGARAWLAMLVGGALWFLSGWDQGPTLL AVLGPYCTLLAASPFPAEGTRNFIRGTLYAIPAALLCKFLLLPLINGFPLLLLCLAFFWSFGIQATTVPRRALQGIAYLIAFNTLVATGNLARFDFGDFA NQSCAWVLALCISLLVYRLLPKDLERHSASLLDHLRRETLALLRRRAGFDAHAWQARQQHRIAQLGALHGMEHPRSALALRLGFVSLQLGRESRRLWRAL AGLDPAAAEARWIERALRAIAVRHRDPPLAARHARRAGARLAAAGEWRLAAILTDLAWLLRAYSQSVSSDGAQHGEKTS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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