Pseudomonas aeruginosa PAO1, PA1120 (tpbB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCCTGCCTGGGCGGCGGAGGCCTGTGGGCGGACGACGCACGGACGTCGATCGAGCAACGCAGCAATGCGGTCAGCCAGGTTCTGCTGGGCATATTCAGCT ACGTGCGCTGGCCGAAGGAGCCGGCGGTCCTGCAACTCTGCGTGGTCGGACCGACCGAGTACGCCGACGGCCTGCTCCGCGGCATGGTGCAGGCCAATGG CAGGCGCGTGCATGCGGAACGCCGCGCGGTGGACAACCCGGACCTCGGCACGCTCTGCAACGTGATCTACCTCGGAGTGGTCGACGAGCGCGAGCGCCAG CAGGTGTTCCGCAGCCTGGCCGGGCATCCGGTGCTGTCCATCAGCGAGCGCGGCACCGAATGCAGCGTCGGCAGCATGTTCTGCCTCAACGTCGGCGGCC CGCGCATCACCTTCGAGGCCAATCTCGACTCCATCGCCCGCAGCGGCGTACGCGTGCACCCGAGCGTATTGAAACTGGCAAGGCGGCAGGCCACTCCGTG
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| DNA Sequence for Gene |
>PA1120
|tpbB
ATGAACCGTCGTCGTCGCTATACGGGTTCCAATCCATCGCTGCGCCGGGTGCTCTATCGCGCGCACCTGGGCGTGGCGCTGGTCGCGGTATTCACCGCCG GGCTGGCGGTGACCCTGGTCGGCCTGCTGACCCTGCGCGCCTATGCCGACCCCAACCAGCAACTGATCGCCCGTTCCATCAGCTATACCGTCGAGGCCGC GGTGGTCTTCGGCGATGCCCAGGCCGCCGAGGAGTCCCTGGCGCTGATCGCCTCCAGCGAAGAGGTCTCCAGCGCCATCGTCTACGACCGCCAGGGACAG ACCCTGGCCAGTTGGCATCGGGAAAGCACCGGGCCGCTGCACCTGCTGGAACAGCAACTGGCGCACTGGCTGCTCAGCGCGCCGACCGAACAACCGATCC TGCACGACGGCCAGAAGATCGGTTCGGTGGAGGTGAAGGGCTCCGGCGGCAGCCTGCTGCGCTTCCTGCTCACCGGTTTCGCCGGCATGGTCCTGTGCCT GCTGCTTACCGCCCTGGGCGCCTTCTACCTGTCGCGGCGGCTGGTACGCGGTATCGTCGGCCCGCTCGACCAACTGGCGAAGGTCGCGCATACCGTGCGC CGCGAACGGGATTTCGAGAAGCGCGTACCGGAAGCCGGCATCGCCGAGCTGAGCCAACTGGGCGAGGACTTCAACGCCCTGCTCGACGAACTCGAATCCT GGCAGGCGCGCCTGCAGGACGAGAACGCCTCGCTGGCGCACCAGGCCCACCACGACAGCCTGACCAGCCTGCCCAACCGCGCCTTCTTCGAAGGCCGCCT GAGCCGGGCGCTGCGCGATGCCAACGAGCATCGCGAGCAATTGGCGGTGCTGTTCATCGACAGCGACCGCTTCAAGGAGATCAACGACCGCCTCGGCCAT GCCGCCGGCGACACCGTGCTGGTCAACATCGCCATGCGCATCCGTGGGCAGTTGCGCGAAAGCGACCTGGTGGCGCGCCTGGGCGGCGACGAATTCGCCG TCCTGCTCGCACCGCTGGCGTCCGGCGCCGACGCCCTGCGCATCGCCGACAACATCATCGCCAGCATGCAGGCGCCGATCCGGCTCAGCGACGGCAGCAC TGTGAGTACCTCACTGACCATCGGCATCGCCCTCTATCCCGAGCATGCGGATACCCCGGCGGCGCTGCTCCACGACGCCGACATGGCGATGTACATCGCC AAGCGCCAGGCCCGCGGCAGCCGGCGCCTGGCGGAACTCAACGACCCCCGCATCCTTCAGGAAGAAAAGGAGATAGACAGTGCTACCCCAGAGGCTCCAC CCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATTGCTCGCCCTCGCCCTGTTCAGCCTTGTGCTGGGCCTGGCCGGTTGCCAGACCAAGCCGCCGCAGACCGGCCTGAGCGCCGAGCAGATCGCCGTGCTC CAGGAGCAGGGCTTCGAACTCCGCGACGAAGGCTGGGAGTTCGGCATGTCGAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCC GCAACACCCTGACCAAGATCGCCCGCGCCCTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAA TCAAAAGCTCTCCGAACGGCGCGCCGAATCGGTGGCCGCGGTATTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTTGGCATGAGC AAGCCCGTGGCCGATAACAAGACCCGCGCCGGCCGCAGCGAGAACCGCCGCGTCGCCATCATCGTTCCCGCCGAGTAATCCTGCGCTCGCGGGCTGCGTA
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| Amino Acid Sequence |
>diguanylate cyclase TpbB
MNRRRRYTGSNPSLRRVLYRAHLGVALVAVFTAGLAVTLVGLLTLRAYADPNQQLIARSISYTVEAAVVFGDAQAAEESLALIASSEEVSSAIVYDRQGQ TLASWHRESTGPLHLLEQQLAHWLLSAPTEQPILHDGQKIGSVEVKGSGGSLLRFLLTGFAGMVLCLLLTALGAFYLSRRLVRGIVGPLDQLAKVAHTVR RERDFEKRVPEAGIAELSQLGEDFNALLDELESWQARLQDENASLAHQAHHDSLTSLPNRAFFEGRLSRALRDANEHREQLAVLFIDSDRFKEINDRLGH AAGDTVLVNIAMRIRGQLRESDLVARLGGDEFAVLLAPLASGADALRIADNIIASMQAPIRLSDGSTVSTSLTIGIALYPEHADTPAALLHDADMAMYIA KRQARGSRRLAELNDPRILQEEKEIDSATPEAPPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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