Pseudomonas brassicacearum PA1G7, AW28_RS15460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas brassicacearum strain PA1G7 Scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATCGACCAGGGCGGTGCCGAGCAGCTGCTTGGTCACGGTGACATGCTCTACATGCCGCCGGGCACCAGCCTGCCGATCCGTGTGCATGGCGCGTTCGT CTCCGACGACGAAGTGCACCGCGTGGTGGAGGCCTGGAAACTGCGTGGCGCTCCTGAATACAACGACGACATCCTCAACGGTGTCGAAGAAGCCGGCAGC GGTTTCGAGGGCAGCAGCGGCGGCGGTGACGACGATGCTGAAACCGATGCGCTCTATGACGAAGCGGTGCAATTCGTCCTGGAAAGCCGCCGGGCCTCGA TTTCTGCCGTTCAGCGCAAGCTGAAGATTGGCTACAACCGCGCCGCCCGCATGATCGAAGCCATGGAAATGGCCGGGGTGGTGACGGCCATGAACACCAA CGGCTCGCGCGAAGTACTGGCGCCGGGCCCGATGCGCGACTAACGACCCGGGCGGCCTGCTGACAGACCGCTCGACCCCCACGACTTCATGAGGACTCCC
DNA Sequence for Gene
>AW28_RS15460
ATGCGCCTGATTCGCATGTTGCTGTTGCCCGTACTGGCCTTGTCTACTTTGTCGGCCCACGCCGGCGAAAAGGACGTGGCTCGCCTGACCCAATTGCTGG GAGGCTCCCAGACCCTGACCGCGCGTTTCTCCCAGTTGACCCTCGATGGCAGTGGTACCCAGTTGCAGGAAACCGCTGGCGACATGGCCCTGCAGCGTCC AGGCCTGTTCTACTGGCACACCGATGCGCCAGCCGAGCAATTGATGGTCTCAGATGGCAAGAAAGTTTCCCTGTGGGACCCGGACCTGGAGCAGGTGACC ATCAAGACCCTCGACCAGCGCCTGACCCAGACGCCGGCGCTGCTGCTCTCCGGTGACATTTCCGAGATCAGCCAGAGCTTCGAGATCACCTCCAAGGAGG CCGGTGGCGTGATTGACTTCACCCTCAAGCCCAAGACCAAGGATAGCCTGTTCGACAGTCTGCGCCTGTCGTTCCGTAACGGCCTGGTCAACGACATGCA ACTGATCGACAGTGTTGGCCAGCGCACCAATATCCTGTTCACCGGGGTCAAGGCCAACGAGCCGATCGCCGCGTCCAAGTTCAAGTTCGATATCCCCAAG GGTGCGGACGTGATCCAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCAAGACCCCCTGTGGGAAATGGCCTGTAGGAATGGTCTGTGGGAGCAAGGCTTGCCCGCGATACAGGCACCTCGGTGTATCTGGTAGACCGAGGCGAT GCAATCGCGGGCAAGCCTTGCTCCCACAGGTCTGCTCCCACAGATCTGCTCCGGCAGAGATCATCGGCACCAGGATTCAGTGGAGGTTGCATAAGTAGTG ATGGACCTGTTTCGAAGCGCCCCGATTGCCCAGCCCTTGGCCGCCCGCCTGCGCGCGACCAACCTGGATGAGTACGTCGGCCAGGAGCATGTGCTCGCCC GCGGCAAGCCTCTGCGCGAGGCCTTGGAGCAGGGTGCGTTGCACTCGATGATCTTCTGGGGCCCGCCGGGCGTGGGCAAGACCACCCTGGCGCGACTGCT GGCGGAAGTCTCGGACGCCCATTTCGAAACGGTGTCGGCGGTACTGGCCGGGGTCAAGGAGATCCGCCAGGCGGTGGAAGTGGCCAAGCAGCAGGCCGGG
Amino Acid Sequence
>membrane protein
MRLIRMLLLPVLALSTLSAHAGEKDVARLTQLLGGSQTLTARFSQLTLDGSGTQLQETAGDMALQRPGLFYWHTDAPAEQLMVSDGKKVSLWDPDLEQVT IKTLDQRLTQTPALLLSGDISEISQSFEITSKEAGGVIDFTLKPKTKDSLFDSLRLSFRNGLVNDMQLIDSVGQRTNILFTGVKANEPIAASKFKFDIPK GADVIQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site