Pseudomonas sp. UW4, PputUW4_04819 (btuB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGCCCTGCTGGTGTTCGGCGTGCAACTGGCCGAAGCCCTGAAAGTCGCCGAGACGCTGGATGCGACCGTGGTCGACATGCGCTTCGTCAAGCCGCTGG ATGAAGCGCTGGTTCGCGAAATCGCCGGCAGTCACGAGCTGCTGGTCACTGTCGAAGAAAACGCGGTCATGGGCGGCGCCGGTGGCGCGGTCAGCGAGTT CCTCGCCCGGGAAAACATCCTCAAGTCGATGCTGCACCTGGGCTTGCCGGACATCTACGTCGAGCACGCCAAGCCTGCGCAAATGCTGGCCGAGTGCGGG CTGAATGAAGCCGGGATCGAGGCATCGATCCGCGAGCGCCTGCAACTGCTCAACATCTAAACGCAAAACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGC CGGTATATCCAACATCAATGTTGGCTGTACCGACGCCTTCGCGAGCAAGCCCGCTCCCACATTTGATTTGTGTGCACCACGAAACACCATCGGACCACCC
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| DNA Sequence for Gene |
>PputUW4_04819
|btuB
ATGAAGTTCTCCCGCCTCGCCCTGCCCCTGTTTCTTCTGCCAACCGCAAACGCCCTCGCCGACACCTTCGAACGCGATCAAGCGCTGAAGCTGCCCGATG TGCTGATCAGCGCCAACCGCCAGGTCGAAGCGCGCAACGACAGCAGCGCCGCCAACACCGTGTTCACCCGCGACGACATCGATCGCCTGCAACCCGATAG CGTCACCGACCTGCTGCGCCGCGTACCGGGCGTGCAAATCGTGCAGGCCGGCGGGCGCGGCAGTGTGCCGGGTGTCTACATCCGCGGCACGCAATCAGCC CAGAGCCTGGTACTGGTGGACGGTCAGCGCATCGGCAGCTCGACCTCCGGCGACAGCAACCTGCAGCACATCAACATTGATCAGGTCGAGCGCGTGGAAG TGCTGCGCGGCTCCCGTTCGGTGATTTATGGCAGCGATGCGATTGGCGGGGTAATCCAGATCTTCACCCGCCGTGGCGGCGAACAGGGCCTGCAACCGCG CCTGCACACGGCGTTTGGCAGCAACCAGACCTGGGAGCGCAGCCTTGGCTTGTCCGGCGGGGACGAGCGAACCCGTTTCAATCTCGGCGCCAGCCTCGAC GAAACCGCCGGGATCAATCGCACCCACGAGTCATACCCCAGCGATGGCGACCATGACGAGTACCGAAACCAGTCATTTAGCCTGAGCTTTAGCCACGCAC TCAGCGATGACATCGAGATCGGCGCCAACGCGCTGGATAATCGCGGCAAAAGCGAATTCGACAACCCGTTCGGGCGCTTCGACATGAATACGTTCGAGTC GGTCCAACAGCAGCCCGCCAACGAATTCGATGTGAGCAGTGTCAGCAGCTACATCGACGCGCGCATCAATGATCTGTGGCAAACCCGCATCGAGTTCGGC CATAGCAAAAACCGCGAGAAGACCCTCGACAAACTCAGTGACGAACGCAGCGTGTTCAATACCTACCGGGATTCGGTGAACTGGCAGAACGACCTGACGC TCAACGAGCGCAACAGTCTGCTGCTGGGAGGTGACTGGTATGAAGACCGGATCAACAGCAGCACCGCGTTCGATGAAGACAGTCGCTGGAACCGTGCGGC GTACATCCAGCATCGCTATCGGGCCGACCGTTTCTCCACGGAGCTGGGTTTGCGTCACGATGACAATCAGCAATTTGGCAGCCAGAACACCTGGAGCGGC ACCTTCACCCTGCCGCTGAACCCGGACAACGAAGTGCTGTTCACCTACAGCGAAGGCTTCCGCGCGCCGACATTCAACGATCTGTACTACCCCGACTTCA GCAACCCGGACCTCAAGCCTGAAACCTCGAAAAGCTATGAGCTGCAATGGCGCAGCCAATTGACCGAGAGCAGTCGTCTGGAAACGTCGCTGTATCGCAC CGACGTTGAAGACGCGATCATCTTCGGCAGCAACTCGCGCCCCGAGAACGTTGCCTCGGCGCGGATCAACGGCTTCGAAGCAACGCTGAAGCAGGAACTG TTCGACTGGCAGAGCAATCTCGGCGTGGCGATCATCGATCCGCGCGACCGTGACACGGGCCACACCCTGGCCCGTCGCGCGCGGCGTACCTTGAGTTGGG ATCTGGACCGACAGTTCGATCGCCTGGGCCTCGGCGCCAGTTGGCAAGCGGTCAGCAGCAGCTATGACGACCAGAACAATCAACAGCCCCTCGGCGGCTA TGCCTTGCTGGGGCTGCGCAGCAGTTGGGAGCTCAATCGTGAAGTCCGGCTGGAACTGAAGGTCGACAACCTGCTGGACAAGGGTTACAGCCGGGCGTTG TACAGCTACCAGGGCAGCCAGTACGGGTATCGCGAGGAAGGTCGGGCGTGGATGTTCGGGGTGACATGGACGCCTGGAATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGGAATCTGTACTGTCTGGACCGGCCTCTTCGCGAGCAGGCTCGCTCCCACAGTTGATCGCGGCGACCTACATCTCGTAAACAACATAGATCCATTGT GGGAGCGAGCCCGCTCGCGAAGAGATCACCTCGGTCTCAGAGTCCAGGCGCGATCAATTGGCAAAGCTTTGCAGTCGCCTCGACCATCTGCCCACTCGGC CGCTCCAGCCCCTTGTCCGTGACCAATCGCAACTGTCCTTGCGCCACCGCCGCCACCTGCGGCCAGGCTTTCCACGCGTCGAGCTGCGCCTGATCGCTGG CCAGAATCACCTCGGGATTACGCTGCAACACGGCTTCCACGCTGACTTGCGGTGCCGGCAGCTTCAGGTCGGCGAACACGTTTTGGGCTCCGCAGACCTC CAGCGCGTCGCTGATGATCTGCTCGCCACCAACCGTATACAGCGGCCGATCCCAGACCTGATAGAACACCTGTAGCGGCTTGTCCCGTCGATAGCGTTGG
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| Amino Acid Sequence |
>B12 family TonB-dependent receptor
MKFSRLALPLFLLPTANALADTFERDQALKLPDVLISANRQVEARNDSSAANTVFTRDDIDRLQPDSVTDLLRRVPGVQIVQAGGRGSVPGVYIRGTQSA QSLVLVDGQRIGSSTSGDSNLQHINIDQVERVEVLRGSRSVIYGSDAIGGVIQIFTRRGGEQGLQPRLHTAFGSNQTWERSLGLSGGDERTRFNLGASLD ETAGINRTHESYPSDGDHDEYRNQSFSLSFSHALSDDIEIGANALDNRGKSEFDNPFGRFDMNTFESVQQQPANEFDVSSVSSYIDARINDLWQTRIEFG HSKNREKTLDKLSDERSVFNTYRDSVNWQNDLTLNERNSLLLGGDWYEDRINSSTAFDEDSRWNRAAYIQHRYRADRFSTELGLRHDDNQQFGSQNTWSG TFTLPLNPDNEVLFTYSEGFRAPTFNDLYYPDFSNPDLKPETSKSYELQWRSQLTESSRLETSLYRTDVEDAIIFGSNSRPENVASARINGFEATLKQEL FDWQSNLGVAIIDPRDRDTGHTLARRARRTLSWDLDRQFDRLGLGASWQAVSSSYDDQNNQQPLGGYALLGLRSSWELNREVRLELKVDNLLDKGYSRAL YSYQGSQYGYREEGRAWMFGVTWTPGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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